|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G10030 | OBF4, TGA4 | OCS ELEMENT BINDING FACTOR 4, TGACG motif-binding factor 4 (.1.2) |
>AT5G10030.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| HindIII | A|AGCTT | 299 |
| NheI | G|CTAGC | 252 |
| SacI | GAGCT|C | 435 |
| StyI | C|C[AT][AT]GG | 810 |
| XbaI | T|CTAGA | 223 |
Click here to view TAIR data
>AT5G10030.1 length:1095
ATGAATACAA CCTCGACACA TTTTGTTCCA CCGAGAAGGT TTGAAGTTTA | 50 |
CGAGCCTCTC AACCAAATCG GTATGTGGGA AGAAAGTTTC AAGAACAATG | 100 |
GAGACATGTA TACGCCTGGC TCTATCATAA TCCCGACTAA CGAAAAACCA | 150 |
GACAGCTTGT CAGAGGATAC TTCTCATGGG ACAGAAGGAA CTCCTCACAA | 200 |
GTTTGACCAA GAGGCTTCCA CATCTAGACA TCCTGATAAG ATACAGAGAA | 250 |
GGCTAGCACA GAATCGAGAG GCAGCTAGGA AAAGTCGTTT GCGCAAGAAA | 300 |
GCTTATGTTC AGCAGCTAGA GACTAGCCGG TTAAAGCTAA TTCATTTAGA | 350 |
GCAAGAACTC GATCGTGCTA GACAACAGGG TTTCTATGTG GGGAACGGAG | 400 |
TAGATACCAA TGCTCTTAGT TTCTCAGATA ACATGAGCTC AGGGATTGTT | 450 |
GCATTTGAGA TGGAATATGG ACATTGGGTG GAAGAACAGA ACAGGCAAAT | 500 |
ATGTGAACTA AGAACGGTTT TACATGGACA AGTTAGTGAT ATAGAGCTTC | 550 |
GTTCTCTAGT CGAGAATGCC ATGAAACATT ACTTTCAACT CTTCCGAATG | 600 |
AAGTCAGCCG CTGCAAAAAT CGATGTTTTC TATGTCATGT CCGGAATGTG | 650 |
GAAAACTTCA GCAGAGCGGT TTTTCTTGTG GATAGGCGGA TTTAGACCCT | 700 |
CAGAGCTTCT CAAGGTTCTG TTACCGCATT TTGATCCTTT GACGGATCAA | 750 |
CAACTTTTGG ATGTATGTAA TCTGAGGCAA TCATGTCAAC AAGCAGAAGA | 800 |
TGCGTTATCC CAAGGTATGG AGAAACTGCA ACATACATTA GCAGAGAGTG | 850 |
TAGCAGCCGG GAAACTTGGT GAAGGAAGTT ATATTCCTCA AATGACTTGT | 900 |
GCTATGGAGA GATTGGAGGC TTTGGTCAGC TTTGTAAATC AAGCTGATCA | 950 |
TCTGAGACAT GAGACATTGC AACAGATGCA TCGGATCTTA ACCACGCGAC | 1000 |
AAGCGGCTAG AGGTTTGTTA GCATTAGGGG AGTATTTCCA AAGGCTTCGA | 1050 |
GCTTTGAGTT CGAGTTGGGC GGCTAGGCAA CGTGAACCAA CGTAA | 1100 |
>AT5G10030.1 longest ORF length:364
MNTTSTHFVP PRRFEVYEPL NQIGMWEESF KNNGDMYTPG SIIIPTNEKP | 50 |
DSLSEDTSHG TEGTPHKFDQ EASTSRHPDK IQRRLAQNRE AARKSRLRKK | 100 |
AYVQQLETSR LKLIHLEQEL DRARQQGFYV GNGVDTNALS FSDNMSSGIV | 150 |
AFEMEYGHWV EEQNRQICEL RTVLHGQVSD IELRSLVENA MKHYFQLFRM | 200 |
KSAAAKIDVF YVMSGMWKTS AERFFLWIGG FRPSELLKVL LPHFDPLTDQ | 250 |
QLLDVCNLRQ SCQQAEDALS QGMEKLQHTL AESVAAGKLG EGSYIPQMTC | 300 |
AMERLEALVS FVNQADHLRH ETLQQMHRIL TTRQAARGLL ALGEYFQRLR | 350 |
ALSSSWAARQ REPT | 400 |