fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G10120 Ethylene insensitive 3 family protein (.1)

>AT5G10120.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 845
HindIII A|AGCTT 176
NcoI C|CATGG 568
PstI CTGCA|G 410
SacI GAGCT|C 1128
SpeI A|CTAGT 1102
StyI C|C[AT][AT]GG 568
XhoI C|TCGAG 444, 939, 987


Click here to view TAIR data

>AT5G10120.1 length:1416
ATGGTGGAAG TCGAAGAATT GGAACCACTT AGTCCAATGG ACGATGAAGA 
50
AGAAGAGATA AGCTATGATG ACCTCAAAAG ACGCATGTGG AAAGACCGAA 
100
ACCTCATGGA AAAAAAGCTC AAGCAACAGA AACGACACAG CAACGACGTC 
150
GTTTCGTTTA CAACACACCG AGCCGAAGCT TCACGGCGCA AGAAGATGGC 
200
TCGTTCTCAA GATTCAGTGT TGAAGTACAT GATGAAGATC ATGGAGGTGT 
250
GTAAAGCTAA AGGTTTTGTA TACGGAATTG TACCGGAAAA GGGTAAACCA 
300
ATAACCGGTT CTTCCGATAG CTTAAGACGT TGGTGGAAAG AAAACGTTCA 
350
GTTCGACCAA AACGCTCCAG ACGCTATCAC AGATTACTTA GCACTCGCGG 
400
CTGCTGCTGC TGCAGCAGAG CTAATCGATA AGTCCTCATC ATCCTCGAGC 
450
TTATTACACA TGTTACAGGA ACTGCAAGAC ACGACACTAG GGTCGTTACT 
500
ATCAGCGTTA ATGCAACATT GCATGCCGCC ACAGCGGCGG TTTCCGTTAG 
550
AGAAAGGAAT TGCTCCGCCA TGGTGGCCGA CGGGGACGGA GCTTTGGTGG 
600
GGAGAACAAG GAGCGGCACA TGAGCACGGT GCACCGCCAT ATCGAAAGCC 
650
GCACGATTTG AGAAAATCTT GGAAAGTTAG TGTTCTCGCG GCTGTGATTA 
700
AACACATGTC GCCGAATTTG GGAAGAGTGA GACGTCTGGC GAGACAATCT 
750
AAAAGTTTGC AAGATAAAAT GATGGCTAAA GAGACTGATA CTTGGTCTCG 
800
TGTCTTAAAC CAAGAAGAAG CTCTTCTCAA TATCAAAGAC CTCAAGATCT 
850
CGGAAGATCA GGACGATCAA GAATCGTCGG GGTCTAAGAG AAAAAGTGAG 
900
TCTATGGAAC CGTCTAAGAG TGTTTACACT TGCCAAAACT CGAGTTGTCC 
950
TAAAAGTGAT GTGAGTTTTG GATTCGGGGA CAAGAACTCG AGGACGGGTC 
1000
ATGAGATCCA GTGTCTTTAT GGGTCGAACC AAGAACCGAG CCAGAGCGGT 
1050
GAATATACAT CTTCCTTGCT TGAAACGGTT CCAAGTATTG TTACTAATTC 
1100
GACTAGTGAA GATGATTATT ACAATGTGAG CTCGCGTGCA CTGGACAAGC 
1150
GAGATGATGA TGATCATAGC ATTAATGGGA ATTGGATGGA ATATTTCTGG 
1200
TTAGAAAAGA TGCAGCAGGA GTTTCATTGC TCTAGGAGAT TCGAAGATGA 
1250
TGAGGGTACT GGAACGGACT TTGACCAACT CACAGAATCT GATCGATCGG 
1300
ACAACGTGAA TTTGAACCAA CTTACAAAAT CTGATCGATC GGACAACGTG 
1350
AACCGGAGTG CTTTTTCAGT TTGGGACATG GGTTGCGAGG ACAAAGACAT 
1400
ATACATGTTC GATTAA
1450

>AT5G10120.1 longest ORF length:471
MVEVEELEPL SPMDDEEEEI SYDDLKRRMW KDRNLMEKKL KQQKRHSNDV 
50
VSFTTHRAEA SRRKKMARSQ DSVLKYMMKI MEVCKAKGFV YGIVPEKGKP 
100
ITGSSDSLRR WWKENVQFDQ NAPDAITDYL ALAAAAAAAE LIDKSSSSSS 
150
LLHMLQELQD TTLGSLLSAL MQHCMPPQRR FPLEKGIAPP WWPTGTELWW 
200
GEQGAAHEHG APPYRKPHDL RKSWKVSVLA AVIKHMSPNL GRVRRLARQS 
250
KSLQDKMMAK ETDTWSRVLN QEEALLNIKD LKISEDQDDQ ESSGSKRKSE 
300
SMEPSKSVYT CQNSSCPKSD VSFGFGDKNS RTGHEIQCLY GSNQEPSQSG 
350
EYTSSLLETV PSIVTNSTSE DDYYNVSSRA LDKRDDDDHS INGNWMEYFW 
400
LEKMQQEFHC SRRFEDDEGT GTDFDQLTES DRSDNVNLNQ LTKSDRSDNV 
450
NRSAFSVWDM GCEDKDIYMF D
500