fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G10280 ATMYB92, AtMYB64 myb domain protein 92 (.1)

>AT5G10280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 828
BglII A|GATCT 7
EcoRV GAT|ATC 391
HpaI GTT|AAC 568
PvuII CAG|CTG 950
StyI C|C[AT][AT]GG 46


Click here to view TAIR data

>AT5G10280.1 length:1005
ATGGGAAGAT CTCCTATCTC TGATGACTCT GGTCTCAAGA AAGGTCCTTG 
50
GACTCCTGAT GAAGATGAGA AACTTGTCAA CTATGTTCAA AAACATGGTC 
100
ATAGTAGCTG GAGAGCCCTT CCCAAACTCG CTGGTCTTAA CAGGTGTGGG 
150
AAGAGTTGCA GGCTAAGATG GACGAACTAC TTGAGACCAG ACATCAAGAG 
200
AGGGAGATTC TCTCCGGACG AGGAACAGAC TATCTTGAAT CTTCATTCAG 
250
TTCTTGGAAA CAAGTGGTCA ACGATTGCGA ATCAGTTACC AGGGAGAACA 
300
GATAACGAGA TCAAGAATTT CTGGAACACT CATTTGAAGA AGAAGCTGAT 
350
TCAGATGGGT TTTGATCCAA TGACTCACCG TCCAAGAACC GATATCTTCT 
400
CCGGCTTATC TCAGCTCATG TCTTTGTCTT CTAACCTGAG AGGCTTTGTT 
450
GATCTGCAAC AACAGTTTCC TATTGATCAA GAACACACTA TACTCAAACT 
500
CCAAACCGAG ATGGCCAAAC TCCAATTGTT CCAATACCTT CTTCAACCGT 
550
CTTCCATGAG TAACAATGTT AACCCTAATG ACTTTGACAC TCTCAGTCTC 
600
CTTAACTCTA TTGCCTCTTT CAAAGAGACC AGTAATAATA CCACCAGCAA 
650
CAATCTCGAC CTCGGTTTCC TCGGCTCTTA TCTTCAGGAC TTCCACAGCT 
700
TACCTTCCCT GAAAACCCTA AATTCCAACA TGGAACCATC ATCTGTTTTC 
750
CCCCAGAATC TTGATGACAA TCACTTCAAA TTCTCCACTC AAAGAGAAAA 
800
CCTACCCGTG TCTCCAATCT GGCTCTCGGA TCCATCCAGC ACAACTCCTG 
850
CTCATGTGAA TGATGATCTG ATTTTTAACC AATACGGTAT TGAAGATGTC 
900
AATAGCAATA TCACATCTTC AAGCGGTCAA GAATCAGGAG CTTCAGCTTC 
950
AGCTGCATGG CCTGATCATC TATTGGATGA TTCTATATTT TCCGACATTC 
1000
CTTAG
1050

>AT5G10280.1 longest ORF length:334
MGRSPISDDS GLKKGPWTPD EDEKLVNYVQ KHGHSSWRAL PKLAGLNRCG 
50
KSCRLRWTNY LRPDIKRGRF SPDEEQTILN LHSVLGNKWS TIANQLPGRT 
100
DNEIKNFWNT HLKKKLIQMG FDPMTHRPRT DIFSGLSQLM SLSSNLRGFV 
150
DLQQQFPIDQ EHTILKLQTE MAKLQLFQYL LQPSSMSNNV NPNDFDTLSL 
200
LNSIASFKET SNNTTSNNLD LGFLGSYLQD FHSLPSLKTL NSNMEPSSVF 
250
PQNLDDNHFK FSTQRENLPV SPIWLSDPSS TTPAHVNDDL IFNQYGIEDV 
300
NSNITSSSGQ ESGASASAAW PDHLLDDSIF SDIP
350