fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G10510 PLT3, AIL6 PLETHORA 3, AINTEGUMENTA-like 6 (.1.2.3)

>AT5G10510.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 1137
HpaI GTT|AAC 556
NcoI C|CATGG 386
PvuII CAG|CTG 1175, 1511
StyI C|C[AT][AT]GG 386, 1146
XbaI T|CTAGA 1048
XhoI C|TCGAG 896


Click here to view TAIR data

>AT5G10510.1 length:1710
ATGGAGATGT TGAGGTCATC TGATCAGTCT CAGTTTGTCT CCTATGACGC 
50
TTCTTCCGCC GCTTCCTCCT CTCCTTATCT CCTCGATAAT TTCTATGGTT 
100
GGTCAAACCA AAAACCTCAG GAGTTTTTCA AAGAAGAAGC TCAGTTAGCA 
150
GCAGCAGCTT CAATGGCGGA TTCAACAATC TTAACAACAT TCGTAGACCC 
200
ACAATCTCAT CATTCTCAGA ATCACATCCC AAAGCTCGAA GATTTTCTCG 
250
GTGACTCTTC TTCTATCGTT CGTTACTCCG ACAACAGTCA AACCGACACA 
300
CAAGACTCTT CCCTCACTCA AATCTACGAT CCACGTCACC ACCATAACCA 
350
AACCGGCTTT TACTCCGATC ACCACGATTT CAAAACCATG GCCGGTTTTC 
400
AATCCGCTTT CTCTACTAAC TCCGGTTCAG AGGTCGATGA CTCTGCTTCT 
450
ATCGGAAGGA CTCATCTTGC TGGAGACTAT TTGGGACACG TGGTTGAATC 
500
TTCTGGTCCG GAGCTAGGGT TTCACGGTGG ATCTACCGGA GCTTTGTCAC 
550
TTGGTGTTAA CGTCAATAAC AATACTAATC ACCGGAATGA TAATGATAAT 
600
CATTACCGAG GCAATAACAA TGGTGAGAGA ATCAACAACA ACAACAACAA 
650
TGACAACGAG AAGACAGATT CTGAGAAGGA GAAGGCTGTT GTGGCTGTGG 
700
AAACATCAGA TTGTTCTAAT AAGAAGATTG CTGATACGTT TGGTCAAAGG 
750
ACTTCGATTT ACAGAGGTGT TACTCGACAT AGATGGACGG GAAGATATGA 
800
AGCACATCTA TGGGATAATA GCTGTAGGAG AGAAGGTCAG GCCAGGAAGG 
850
GACGTCAAGT ATACTTGGGT GGATATGACA AAGAAGATAA GGCAGCTCGA 
900
GCTTACGATT TAGCAGCTCT GAAATACTGG AATGCTACTG CTACCACCAA 
950
TTTCCCTATT ACGAATTACT CGAAAGAAGT GGAGGAAATG AAGCACATGA 
1000
CCAAGCAAGA GTTCATTGCC TCCCTCAGGA GGAAGAGTAG CGGTTTCTCT 
1050
AGAGGAGCTT CGATATACCG AGGTGTTACA AGGCATCATC AACAAGGACG 
1100
TTGGCAAGCA AGGATTGGCC GAGTTGCTGG GAACAAAGAT CTTTACCTTG 
1150
GAACCTTTGC AACGGAAGAG GAAGCAGCTG AAGCGTATGA CATAGCAGCA 
1200
ATCAAATTCA GAGGAATAAA CGCTGTAACT AACTTTGAGA TGAACCGTTA 
1250
CGACGTTGAA GCCATCATGA AGAGTGCACT TCCCATCGGT GGTGCAGCTA 
1300
AACGTCTTAA GCTCTCTTTG GAAGCTGCTG CTTCATCAGA GCAGAAACCA 
1350
ATCCTCGGTC ATCATCAACT TCACCATTTC CAGCAACAAC AACAACAACA 
1400
ACAGCTTCAG CTTCAGTCAT CTCCTAATCA CAGTAGCATT AACTTCGCTC 
1450
TCTGTCCTAA TTCAGCAGTT CAGTCTCAAC AGATCATTCC TTGTGGAATC 
1500
CCTTTTGAAG CAGCTGCTCT TTACCACCAC CACCAACAAC AACAGCAACA 
1550
CCAACAGCAG CAGCAGCAAC AGAACTTCTT CCAGCATTTT CCGGCGAATG 
1600
CAGCTTCTGA CTCGACCGGG TCTAACAACA ACTCCAACGT TCAGGGAACA 
1650
ATGGGACTTA TGGCACCAAA TCCGGCTGAG TTCTTCCTCT GGCCTAATCA 
1700
GTCTTACTAA 
1750

>AT5G10510.1 longest ORF length:569
MEMLRSSDQS QFVSYDASSA ASSSPYLLDN FYGWSNQKPQ EFFKEEAQLA 
50
AAASMADSTI LTTFVDPQSH HSQNHIPKLE DFLGDSSSIV RYSDNSQTDT 
100
QDSSLTQIYD PRHHHNQTGF YSDHHDFKTM AGFQSAFSTN SGSEVDDSAS 
150
IGRTHLAGDY LGHVVESSGP ELGFHGGSTG ALSLGVNVNN NTNHRNDNDN 
200
HYRGNNNGER INNNNNNDNE KTDSEKEKAV VAVETSDCSN KKIADTFGQR 
250
TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ ARKGRQVYLG GYDKEDKAAR 
300
AYDLAALKYW NATATTNFPI TNYSKEVEEM KHMTKQEFIA SLRRKSSGFS 
350
RGASIYRGVT RHHQQGRWQA RIGRVAGNKD LYLGTFATEE EAAEAYDIAA 
400
IKFRGINAVT NFEMNRYDVE AIMKSALPIG GAAKRLKLSL EAAASSEQKP 
450
ILGHHQLHHF QQQQQQQQLQ LQSSPNHSSI NFALCPNSAV QSQQIIPCGI 
500
PFEAAALYHH HQQQQQHQQQ QQQQNFFQHF PANAASDSTG SNNNSNVQGT 
550
MGLMAPNPAE FFLWPNQSY
600