fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G10570 bHLH061 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G10570.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 289
HindIII A|AGCTT 430
XhoI C|TCGAG 283


Click here to view TAIR data

>AT5G10570.1 length:948
ATGGAAACGG AATTGACGCA ATTGAGAAAA CAAGAAAGCA ACAATCTCAA 
50
CGGCGTTAAT GGAGGATTCA TGGCGATTGA CCAATTCGTC CCAAATGATT 
100
GGAACTTCGA TTACCTCTGT TTCAACAATC TTCTCCAAGA AGACGACAAC 
150
ATTGATCATC CTTCTTCTTC TTCTTTGATG AATCTAATTT CTCAGCCACC 
200
TCCATTGCTT CATCAACCAC CACAACCGTC GTCACCTCTT TATGATTCTC 
250
CGCCGCTCTC CTCCGCTTTC GACTATCCTT TTCTCGAGGA TATCATACAC 
300
TCCTCTTATT CTCCTCCTCC ATTGATCCTT CCGGCTTCGC AAGAGAACAC 
350
CAACAATTAC TCACCATTGA TGGAGGAAAG CAAGAGCTTC ATAAGCATCG 
400
GAGAGACTAA CAAGAAAAGG AGTAACAAGA AGCTTGAAGG TCAGCCTTCG 
450
AAGAATCTTA TGGCGGAGAG ACGGCGGAGG AAACGGTTAA ATGACCGACT 
500
CTCCCTGCTC CGATCCATTG TCCCTAAAAT CACCAAGATG GATAGGACAT 
550
CGATACTAGG AGATGCAATA GATTACATGA AGGAGCTTTT GGACAAGATT 
600
AACAAGTTGC AAGAAGACGA ACAAGAACTT GGAAGCAACT CTCATCTAAG 
650
CACCCTCATT ACAAACGAAT CTATGGTCAG AAACTCCCTA AAGTTTGAAG 
700
TAGATCAAAG GGAAGTTAAT ACGCATATTG ATATATGTTG TCCTACGAAA 
750
CCGGGTTTGG TTGTATCAAC GGTTAGTACA TTGGAGACTC TAGGATTAGA 
800
GATTGAACAA TGTGTCATTA GCTGCTTCAG TGACTTCTCA TTGCAGGCTT 
850
CTTGTTTTGA GGTTGGTGAG CAGAGATACA TGGTTACTTC GGAAGCTACT 
900
AAACAAGCAC TAATCAGAAA CGCAGGTTAT GGAGGAAGAT GTCTGTAG
950

>AT5G10570.1 longest ORF length:315
METELTQLRK QESNNLNGVN GGFMAIDQFV PNDWNFDYLC FNNLLQEDDN 
50
IDHPSSSSLM NLISQPPPLL HQPPQPSSPL YDSPPLSSAF DYPFLEDIIH 
100
SSYSPPPLIL PASQENTNNY SPLMEESKSF ISIGETNKKR SNKKLEGQPS 
150
KNLMAERRRR KRLNDRLSLL RSIVPKITKM DRTSILGDAI DYMKELLDKI 
200
NKLQEDEQEL GSNSHLSTLI TNESMVRNSL KFEVDQREVN THIDICCPTK 
250
PGLVVSTVST LETLGLEIEQ CVISCFSDFS LQASCFEVGE QRYMVTSEAT 
300
KQALIRNAGY GGRCL
350