fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G11050 ATMYB64 myb domain protein 64 (.1)

>AT5G11050.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 460, 1066
HindIII A|AGCTT 400
SpeI A|CTAGT 769
StyI C|C[AT][AT]GG 921
XhoI C|TCGAG 901


Click here to view TAIR data

>AT5G11050.1 length:1272
ATGGAAGAAC AGAAAATTCA AGAGAAGAGC CTCGCTCACG GCGCTGCACC 
50
ACCGTTGACG GCGGTTGAGA GATTCTTGAA CGGCCAAAAG AACGAAGCCT 
100
TGTGCTTCAA GAAACAAGAA CGTTCTATAG ACCGACCGAT CGTGAAGACG 
150
ACAAGGGCGA TTGAGATTAG AAATGAAAAC AAAGAGAACA TGATGTTTGG 
200
TCCGAGGAAG GAGAAAAACT TGGCCGTTAT TGGAGAAATC GTCGTTAAAG 
250
GTGCAGCTAA AGATTATACT TGCAAGGATA TAACAAAGAA GCAACCATAC 
300
AAGAATATCA TCAAAGGGCA ATGGACAGCC GATGAAGACA GGAAGTTGAT 
350
AAAGTTGGTG ATGCAACATG GAGAGAGGAA ATGGGCAGTA ATCTCGGAGA 
400
AGCTTGAGGG AAGAGCAGGC AAGCAATGTC GTGAGAGATG GCATAATCAT 
450
CTCCGTCCTG ATATCAAGAA AGATAGTTGG AGTGAAGAAG AAGAGAGACT 
500
TCTTGTGGAA GCACACACCA GAATCGGGAA TAAGTGGGCA GAGATCGCTA 
550
AACTCATACA AGGGCGAACC GAAAACTCGA TCAAGAACCA TTGGAATGCG 
600
ACAAAACGAC GCCAAAACTC AAAACGCAAA CATAAGCGTT CAAAAAACGC 
650
GGATAGTAAC AGCGATATTG ATGATCTCTC TCCATCCGCT AAAAGGCCGC 
700
GCATTCTCGA AGACTATATT AAAAACATCG AGAATAATGA CAAGAACAAT 
750
GGCGAGAACA TCATGACTAC TAGTGGTAAC AATGTTCTTT CGACTTCGAA 
800
TTATGATCAG TTCAATTCTG AAGACTCTAC ATCGTCACTC TTGGATGATC 
850
CTTATGACGA AGAGCTTGTT TTCCTGAAAA ATATCTTTGA GAACCATTCG 
900
CTCGAGAACA TCAATTTGAG CCAAGGTACG GAGATAACCC AGTCTTCTTC 
950
ATCTGGGTTT ATGATCGAGA ACCCTAAACC TAAACCTAAC TTGTACAACA 
1000
ATACTTTTGG AACACATCTT GGAGCAATGG TCACAGAACC TGCCAATTCT 
1050
TCCCACCTCG CATCTGATAT CTACTTATCT GATTTGTTGA ACGGTACGGC 
1100
GTCGTCTTCT TCTTCACTTA CTTTTCTGTC TTCCAACAAC AATGAGCATG 
1150
CCGGTGAAAA CGAGTTGCTT TTGCCCCAAG CTAACTCCAC TAGCGAAAGA 
1200
AGAGAAATGG ATCTGATAGA AATGTTGTCT GGTTCTACTC AAGGTAGCAA 
1250
CATTTGGTTC CCATTGTTCT AG
1300

>AT5G11050.1 longest ORF length:423
MEEQKIQEKS LAHGAAPPLT AVERFLNGQK NEALCFKKQE RSIDRPIVKT 
50
TRAIEIRNEN KENMMFGPRK EKNLAVIGEI VVKGAAKDYT CKDITKKQPY 
100
KNIIKGQWTA DEDRKLIKLV MQHGERKWAV ISEKLEGRAG KQCRERWHNH 
150
LRPDIKKDSW SEEEERLLVE AHTRIGNKWA EIAKLIQGRT ENSIKNHWNA 
200
TKRRQNSKRK HKRSKNADSN SDIDDLSPSA KRPRILEDYI KNIENNDKNN 
250
GENIMTTSGN NVLSTSNYDQ FNSEDSTSSL LDDPYDEELV FLKNIFENHS 
300
LENINLSQGT EITQSSSSGF MIENPKPKPN LYNNTFGTHL GAMVTEPANS 
350
SHLASDIYLS DLLNGTASSS SSLTFLSSNN NEHAGENELL LPQANSTSER 
400
REMDLIEMLS GSTQGSNIWF PLF
450