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| Locus | Common name | Short description |
| AT5G11190 | SHN2, SHN3 | shine2, Integrase-type DNA-binding superfamily protein (.1) |
>AT5G11190.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 28 |
| AclI | AA|CGTT | 475 |
| AflIII | A|CPuPyGT | 319 |
| AluI | AG|CT | 264, 279, 290, 502, 529 |
| BlpI | GC|TNAGC | 278 |
| BsaBI | GATNN|NNATC | 521 |
| BsaJI | C|CNNGG | 21 |
| BssKI | |CCNGG | 373 |
| BstBI | TT|CGAA | 106 |
| Cac8I | GCN|NGC | 32 |
| DdeI | C|TNAG | 58, 172, 262, 277, 282, 446 |
| DpnI | GA-CH3|TC | 212, 521, 541 |
| DpnII | |GATC | 212, 521, 541 |
| EaeI | Py|GGCCPu | 162 |
| Fnu4HI | GC|NGC | 120, 144, 292 |
| HaeIII | GG|CC | 161, 370 |
| HhaI | GCG|C | 403 |
| HinP1I | G|CGC | 403 |
| HincII | GTPy|PuAC | 229, 427, 442, 453 |
| HinfI | G|ANTC | 62 |
| HpaI | GTT|AAC | 229 |
| HpaII | C|CGG | 372 |
| Hpy188I | TCN|GA | 19, 57, 198, 210, 261, 389 |
| HpyCH4III | ACN|GT | 340 |
| HpyCH4IV | A|CGT | 216, 317, 420, 474 |
| HpyCH4V | TG|CA | 124, 293 |
| MboI | |GATC | 212, 521, 541 |
| MseI | T|TAA | 219, 228 |
| MspI | C|CGG | 372 |
| MwoI | GCNNNNN|NNGC | 120 |
| NciI | CC|[CG]GG | 373 |
| NlaIII | CATG| | 400 |
| NlaIV | GGN|NCC | 208 |
| PshAI | GACNN|NNGTC | 397 |
| RsaI | GT|AC | 2 |
| Sau3AI | |GATC | 212, 521, 541 |
| Sau96I | G|GNCC | 370 |
| ScrFI | CC|NGG | 373 |
| Taqƒ¿I | T|CGA | 8, 105, 377, 408, 543 |
| TfiI | G|A[AT]TC | 62 |
| TseI | G|C[AT]GC | 123, 292 |
| Tsp45I | |GT[CG]AC | 245 |
| Tsp509I | |AATT | 179, 557 |
Click here to view TAIR data
>AT5G11190.1 length:570
ATGGTACATT CGAGGAAGTT CCGAGGTGTC CGCCAGCGAC AATGGGGTTC | 50 |
TTGGGTCTCT GAGATTCGCC ATCCTCTATT GAAGAGAAGA GTGTGGCTTG | 100 |
GAACTTTCGA AACGGCAGAA GCGGCTGCAA GAGCATACGA CCAAGCGGCT | 150 |
CTTCTAATGA ACGGCCAAAA CGCTAAGACC AATTTCCCTG TCGTAAAATC | 200 |
AGAGGAAGGC TCCGATCACG TTAAAGATGT TAACTCTCCG TTGATGTCAC | 250 |
CAAAGTCATT ATCTGAGCTT TTGAACGCTA AGCTAAGGAA GAGCTGCAAA | 300 |
GACCTAACGC CTTCTTTGAC GTGTCTCCGT CTTGATACTG ACAGTTCCCA | 350 |
CATTGGAGTT TGGCAGAAAC GGGCCGGGTC GAAAACAAGT CCGACTTGGG | 400 |
TCATGCGCCT CGAACTTGGG AACGTAGTCA ACGAAAGTGC GGTTGACTTA | 450 |
GGGTTGACTA CGATGAACAA ACAAAACGTT GAGAAAGAAG AAGAAGAAGA | 500 |
AGAAGCTATT ATTAGTGATG AGGATCAGTT AGCTATGGAG ATGATCGAGG | 550 |
AGTTGCTGAA TTGGAGTTGA | 600 |
>AT5G11190.1 longest ORF length:189
MVHSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA | 50 |
LLMNGQNAKT NFPVVKSEEG SDHVKDVNSP LMSPKSLSEL LNAKLRKSCK | 100 |
DLTPSLTCLR LDTDSSHIGV WQKRAGSKTS PTWVMRLELG NVVNESAVDL | 150 |
GLTTMNKQNV EKEEEEEEAI ISDEDQLAME MIEELLNWS | 200 |