Locus |
Common name |
Short description |
AT5G11190 |
SHN2, SHN3 |
shine2, Integrase-type DNA-binding superfamily protein (.1) |
>AT5G11190.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HpaI
| GTT|AAC |
229 |
Click here to view TAIR data
>AT5G11190.1 length:570
ATGGTACATT CGAGGAAGTT CCGAGGTGTC CGCCAGCGAC AATGGGGTTC | 50 |
TTGGGTCTCT GAGATTCGCC ATCCTCTATT GAAGAGAAGA GTGTGGCTTG | 100 |
GAACTTTCGA AACGGCAGAA GCGGCTGCAA GAGCATACGA CCAAGCGGCT | 150 |
CTTCTAATGA ACGGCCAAAA CGCTAAGACC AATTTCCCTG TCGTAAAATC | 200 |
AGAGGAAGGC TCCGATCACG TTAAAGATGT TAACTCTCCG TTGATGTCAC | 250 |
CAAAGTCATT ATCTGAGCTT TTGAACGCTA AGCTAAGGAA GAGCTGCAAA | 300 |
GACCTAACGC CTTCTTTGAC GTGTCTCCGT CTTGATACTG ACAGTTCCCA | 350 |
CATTGGAGTT TGGCAGAAAC GGGCCGGGTC GAAAACAAGT CCGACTTGGG | 400 |
TCATGCGCCT CGAACTTGGG AACGTAGTCA ACGAAAGTGC GGTTGACTTA | 450 |
GGGTTGACTA CGATGAACAA ACAAAACGTT GAGAAAGAAG AAGAAGAAGA | 500 |
AGAAGCTATT ATTAGTGATG AGGATCAGTT AGCTATGGAG ATGATCGAGG | 550 |
AGTTGCTGAA TTGGAGTTGA | 600 |
>AT5G11190.1 longest ORF length:189
MVHSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA | 50 |
LLMNGQNAKT NFPVVKSEEG SDHVKDVNSP LMSPKSLSEL LNAKLRKSCK | 100 |
DLTPSLTCLR LDTDSSHIGV WQKRAGSKTS PTWVMRLELG NVVNESAVDL | 150 |
GLTTMNKQNV EKEEEEEEAI ISDEDQLAME MIEELLNWS | 200 |
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