fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G11260 TED5, HY5 REVERSAL OF THE DET PHENOTYPE 5, ELONGATED HYPOCOTYL 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1)

>AT5G11260.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions


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>AT5G11260.1 length:507
ATGCAGGAAC AAGCGACTAG CTCTTTAGCT GCAAGCTCTT TACCATCAAG 
50
CAGCGAGAGG TCATCAAGCT CTGCTCCACA TTTGGAGATC AAAGAAGGAA 
100
TTGAAAGCGA TGAGGAGATA CGGCGAGTGC CGGAGTTTGG AGGAGAAGCT 
150
GTCGGAAAAG AAACTTCCGG TAGAGAATCT GGATCGGCGA CCGGTCAGGA 
200
GCGGACACAG GCGACTGTCG GAGAAAGTCA AAGGAAGCGA GGGAGGACAC 
250
CGGCGGAGAA AGAGAACAAG CGGCTGAAGA GGTTGTTGAG GAACAGAGTT 
300
TCAGCTCAGC AAGCAAGAGA GAGGAAAAAG GCTTACTTGA GCGAGTTGGA 
350
AAACAGAGTG AAAGACTTGG AGAACAAAAA CTCTGAACTT GAAGAGCGAC 
400
TCTCTACTCT TCAGAACGAG AACCAGATGC TTAGACATAT TCTGAAGAAC 
450
ACAACAGGAA ACAAGAGAGG AGGTGGTGGT GGTTCTAATG CTGATGCAAG 
500
CCTTTGA
550

>AT5G11260.1 longest ORF length:168
MQEQATSSLA ASSLPSSSER SSSSAPHLEI KEGIESDEEI RRVPEFGGEA 
50
VGKETSGRES GSATGQERTQ ATVGESQRKR GRTPAEKENK RLKRLLRNRV 
100
SAQQARERKK AYLSELENRV KDLENKNSEL EERLSTLQNE NQMLRHILKN 
150
TTGNKRGGGG GSNADASL
200