fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G11510 ATMYB3R-4, AtMYB3R4 myb domain protein 3R4, myb domain protein 3r-4 (.1.2)

>AT5G11510.2 CDS map

>>Show genomic map




Uncut enzymes: AscI, EcoRI, KpnI, NheI, NotI, PacI, PstI, SalI, SmaI
Name Recognition sequence Cut positions
ApaI GGGCC|C 244
BamHI G|GATCC 32
BglII A|GATCT 113, 1183
EcoRV GAT|ATC 856, 1266
HindIII A|AGCTT 401, 1689, 1924
HpaI GTT|AAC 471
NcoI C|CATGG 2037
NdeI CA|TATG 1461
PvuII CAG|CTG 98
SacI GAGCT|C 1055, 1296
SpeI A|CTAGT 58
StyI C|C[AT][AT]GG 1028, 2037
XbaI T|CTAGA 1180
XhoI C|TCGAG 83, 985


Click here to view TAIR data

>AT5G11510.2 length:2397
ATGGAAGCTG AGTCTTCAAC CCCTCAGGAA CGGATCCCGA AATTGCGTCA 
50
CGGGAGGACT AGTGGCCCTG CAAGACGTTC AACTCGAGGC CAATGGACAG 
100
CTGAGGAGGA TGAGATCTTG AGAAAAGCTG TCCATAGTTT CAAAGGAAAA 
150
AACTGGAAGA AGATAGCTGA ATACTTCAAG GATCGAACTG ATGTCCAGTG 
200
CCTCCACAGG TGGCAAAAGG TCCTTAATCC TGAACTTGTT AAAGGGCCCT 
250
GGACGAAGGA GGAAGATGAA ATGATCGTTC AGTTAATCGA AAAATATGGG 
300
CCGAAGAAGT GGTCCACTAT TGCTCGATTT TTACCTGGCC GTATTGGAAA 
350
GCAATGTAGA GAGAGGTGGC ACAATCATCT CAATCCTGCC ATAAACAAAG 
400
AAGCTTGGAC TCAAGAAGAA GAGCTGCTTC TGATTCGTGC TCATCAAATA 
450
TATGGTAATA GATGGGCTGA GTTAACAAAG TTCTTGCCTG GAAGGTCGGA 
500
TAATGGAATT AAAAATCACT GGCACAGTTC AGTCAAGAAG AAACTTGATT 
550
CCTACATGTC GTCTGGCCTT TTGGATCAGT ACCAAGCCAT GCCTCTAGCT 
600
CCTTATGAGA GAAGTTCTAC ATTACAATCA ACTTTTATGC AAAGTAATAT 
650
AGATGGAAAT GGCTGCCTAA ATGGACAGGC AGAGAACGAA ATAGACAGCC 
700
GTCAAAATTC AAGCATGGTT GGCTGCTCAC TATCTGCAAG AGACTTTCAA 
750
AATGGAACTA TCAATATTGG GCATGATTTC CACCCCTGTG GAAACTCTCA 
800
AGAGAATGAG CAAACTGCGT ATCATTCAGA GCAGTTTTAC TATCCGGAAT 
850
TGGAGGATAT CTCAGTCTCC ATCTCCGAAG TCTCTTATGA CATGGAAGAC 
900
TGTTCACAGT TTCCTGATCA TAATGTCTCG ACTTCTCCAA GCCAGGATTA 
950
CCAATTTGAT TTTCAGGAAC TATCAGATAT ATCACTCGAG ATGAGACATA 
1000
ATATGTCAGA AATACCAATG CCATACACCA AGGAGAGCAA GGAATCTACT 
1050
CTGGGAGCTC CAAACTCCAC ATTAAATATT GATGTGGCTA CTTACACCAA 
1100
CTCAGCAAAC GTTTTGACAC CTGAAACGGA ATGTTGCAGG GTACTTTTCC 
1150
CTGATCAAGA GAGTGAAGGG CACAGTGTTT CTAGATCTTT GACCCAAGAG 
1200
CCAAACGAGT TTAACCAGGT AGACCGTCGA GATCCTATCT TGTATTCATC 
1250
AGCTTCAGAC AGACAGATAT CAGAAGCTAC AAAATCTCCT ACGCAGAGCT 
1300
CTTCTTCAAG GTTCACTGCA ACGGCCGCCT CAGGAAAAGG AACTCTTCGG 
1350
CCAGCTCCCT TAATCATATC ACCAGACAAG TATAGCAAGA AGTCATCTGG 
1400
ATTGATATGT CATCCCTTTG AGGTAGAACC AAAGTGCACA ACAAATGGAA 
1450
ATGGTAGCTT CATATGCATC GGTGATCCAT CAAGCTCCAC TTGTGTTGAT 
1500
GAAGGGACCA ATAACTCCAG CGAAGAAGAT CAATCATATC ATGTGAATGA 
1550
TCCCAAAAAG TTGGTTCCAG TGAATGATTT TGCTTCTCTG GCAGAAGATA 
1600
GGCCACACTC TCTACCTAAG CATGAGCCAA ACATGACAAA CGAGCAGCAT 
1650
CATGAGGATA TGGGGGCATC ATCAAGTCTT GGTTTCCCAA GCTTCGACTT 
1700
ACCTGTTTTT AACTGTGATC TTCTACAATC TAAAAATGAT CCTCTACACG 
1750
ATTATAGCCC ACTTGGCATA CGCAAGCTAC TGATGTCCAC CATGACGTGC 
1800
ATGAGTCCCC TTCGACTGTG GGAATCTCCC ACTGGGAAAA AGACGTTGGT 
1850
TGGTGCACAG TCAATCCTTA GGAAACGGAC CCGTGATCTG CTGACACCGT 
1900
TATCTGAGAA AAGAAGTGAT AAAAAGCTTG AAATTGATAT AGCAGCCAGT 
1950
CTGGCAAAAG ACTTTTCACG TTTAGATGTG ATGTTTGATG AGACTGAGAA 
2000
TCGGCAATCT AATTTTGGAA ATAGCACTGG TGTCATCCAT GGAGATAGAG 
2050
AAAACCACTT TCACATTTTG AATGGAGACG GTGAAGAATG GAGTGGCAAG 
2100
CCTTCTTCAC TCTTTAGTCA CAGAATGCCA GAAGAAACCA TGCATATCAG 
2150
AAAATCGCTT GAGAAAGTAG ACCAAATTTG CATGGAGGCA AATGTCAGGG 
2200
AAAAGGATGA TTCTGAACAA GATGTTGAGA ATGTAAGTCT CTTTCTTTCC 
2250
TTTAACCATT TGAATATAAG TTGTGCTACT GGTTTACACA AACTCAGTTC 
2300
CTTTAGATTT TGTCGCCAAT CATGTCATTT TGTCACCTGT GTTAAAATCT 
2350
TCATTGTTTT GGTGAGTTTT AATCGTCATT GTAGCAATAG ATTGTAG
2400

>AT5G11510.2 longest ORF length:798
MEAESSTPQE RIPKLRHGRT SGPARRSTRG QWTAEEDEIL RKAVHSFKGK 
50
NWKKIAEYFK DRTDVQCLHR WQKVLNPELV KGPWTKEEDE MIVQLIEKYG 
100
PKKWSTIARF LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELLLIRAHQI 
150
YGNRWAELTK FLPGRSDNGI KNHWHSSVKK KLDSYMSSGL LDQYQAMPLA 
200
PYERSSTLQS TFMQSNIDGN GCLNGQAENE IDSRQNSSMV GCSLSARDFQ 
250
NGTINIGHDF HPCGNSQENE QTAYHSEQFY YPELEDISVS ISEVSYDMED 
300
CSQFPDHNVS TSPSQDYQFD FQELSDISLE MRHNMSEIPM PYTKESKEST 
350
LGAPNSTLNI DVATYTNSAN VLTPETECCR VLFPDQESEG HSVSRSLTQE 
400
PNEFNQVDRR DPILYSSASD RQISEATKSP TQSSSSRFTA TAASGKGTLR 
450
PAPLIISPDK YSKKSSGLIC HPFEVEPKCT TNGNGSFICI GDPSSSTCVD 
500
EGTNNSSEED QSYHVNDPKK LVPVNDFASL AEDRPHSLPK HEPNMTNEQH 
550
HEDMGASSSL GFPSFDLPVF NCDLLQSKND PLHDYSPLGI RKLLMSTMTC 
600
MSPLRLWESP TGKKTLVGAQ SILRKRTRDL LTPLSEKRSD KKLEIDIAAS 
650
LAKDFSRLDV MFDETENRQS NFGNSTGVIH GDRENHFHIL NGDGEEWSGK 
700
PSSLFSHRMP EETMHIRKSL EKVDQICMEA NVREKDDSEQ DVENVSLFLS 
750
FNHLNISCAT GLHKLSSFRF CRQSCHFVTC VKIFIVLVSF NRHCSNRL
800