fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G11590 DREB3, TINY2 TINY2, Integrase-type DNA-binding superfamily protein (.1)

>AT5G11590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
NcoI C|CATGG 687
SacI GAGCT|C 514
SalI G|TCGAC 562
StyI C|C[AT][AT]GG 576, 687
XhoI C|TCGAG 362, 466, 495


Click here to view TAIR data

>AT5G11590.1 length:711
ATGGCAGAGG AATACTACAG CCTCCGCTCG GAGAGAGTAA CTCAGCTTCT 
50
TGTCCCTAAC TCGGAGTCTG ACTCAGTGAG TGACAAAAGC AAAGCTGAGC 
100
AAAGCGAGAA GAAGACTAAA CGTGGGAGAG ACTCCGGTAA ACACCCTGTT 
150
TATCGCGGAG TAAGGATGAG GAACTGGGGA AAATGGGTGT CGGAGATTCG 
200
TGAGCCGAGG AAGAAATCAC GTATTTGGCT GGGAACTTTC CCGACGCCGG 
250
AGATGGCGGC GCGTGCACAC GACGTGGCGG CTCTGAGCAT TAAAGGAACG 
300
GCCGCTATAC TAAACTTCCC TGAACTCGCT GACTCATTCC CTCGACCCGT 
350
TTCATTAAGC CCTCGAGACA TTCAGACAGC AGCTCTTAAA GCAGCTCACA 
400
TGGAACCGAC GACGTCGTTT TCATCTTCCA CGTCTTCGTC GTCGTCTTTG 
450
TCTTCTACGT CTTCGCTCGA GTCTCTTGTG TTGGTGATGG ACCTCTCGAG 
500
GACTGAGTCG GAGGAGCTCG GTGAGATTGT GGAGCTTCCA AGTCTCGGGG 
550
CGAGTTACGA CGTCGACTCG GCTAACCTTG GGAACGAGTT TGTCTTCTAT 
600
GACTCAGTTG ACTACTGTTT ATATCCGCCG CCGTGGGGAC AGTCGTCCGA 
650
AGATAACTAT GGTCACGGAA TTAGCCCTAA TTTTGGCCAT GGCTTGTCAT 
700
GGGATCTCTA A
750

>AT5G11590.1 longest ORF length:236
MAEEYYSLRS ERVTQLLVPN SESDSVSDKS KAEQSEKKTK RGRDSGKHPV 
50
YRGVRMRNWG KWVSEIREPR KKSRIWLGTF PTPEMAARAH DVAALSIKGT 
100
AAILNFPELA DSFPRPVSLS PRDIQTAALK AAHMEPTTSF SSSTSSSSSL 
150
SSTSSLESLV LVMDLSRTES EELGEIVELP SLGASYDVDS ANLGNEFVFY 
200
DSVDYCLYPP PWGQSSEDNY GHGISPNFGH GLSWDL
250