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| Locus | Common name | Short description |
| AT5G12840 | NF-YA1, ATHAP2A, HAP2A, EMB2220 | "nuclear factor Y, subunit A1", EMBRYO DEFECTIVE 2220, nuclear factor Y, subunit A1 (.1.2.3.4) |
>AT5G12840.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 402 |
| EcoRI | G|AATTC | 134, 548, 798 |
| NdeI | CA|TATG | 431 |
| StyI | C|C[AT][AT]GG | 575 |
Click here to view TAIR data
>AT5G12840.3 length:819
ATGCAATCAA AACCGGGAAG AGAAAACGAA GAGGAAGTCA ATAATCACCA | 50 |
TGCTGTTCAG CAGCCGATGA TGTATGCAGA GCCCTGGTGG AAAAACAACT | 100 |
CCTTTGGTGT TGTACCTCAA GCGAGACCTT CTGGAATTCC ATCAAATTCC | 150 |
TCTTCTTTGG ATTGCCCCAA TGGTTCCGAG TCAAACGATG TTCATTCAGC | 200 |
ATCTGAAGAC GGTGCGTTGA ATGGTGAAAA CGATGGCACT TGGAAGGATT | 250 |
CACAAGCTGC AACTTCCTCT CGTTCAGTAG ATAATCACGG AATGGAAGGA | 300 |
AATGACCCAG CGCTCTCTAT CCGTAACATG CATGATCAGC CACTTGTACA | 350 |
ACCACCAGAG CTTGTTGGAC ACTATATCGC TTGTGTCCCA AACCCATATC | 400 |
AGGATCCATA TTATGGGGGA TTGATGGGAG CATATGGTCA TCAGCAATTG | 450 |
GGTTTTCGTC CATATCTTGG AATGCCTCGT GAAAGAACAG CTCTGCCACT | 500 |
TGACATGGCA CAAGAGCCCG TTTATGTGAA TGCAAAGCAG TACGAGGGAA | 550 |
TTCTAAGGCG AAGAAAAGCA CGTGCCAAGG CAGAGCTAGA GAGGAAAGTC | 600 |
ATCCGGGACA GAAAGCCATA TCTTCACGAG TCAAGACACA AGCATGCAAT | 650 |
GAGAAGGGCA CGAGCGAGTG GAGGCCGGTT TGCGAAGAAA AGTGAGGTAG | 700 |
AAGCGGGAGA GGATGCAGGA GGGAGAGACA GAGAAAGGGG TTCAGCAACC | 750 |
AACTCATCAG GCTCTGAACA AGTTGAGACA GACTCTAATG AGACCCTGAA | 800 |
TTCTTCTGGT GCACCATAA | 850 |
>AT5G12840.3 longest ORF length:272
MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS | 50 |
SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSVDNHGMEG | 100 |
NDPALSIRNM HDQPLVQPPE LVGHYIACVP NPYQDPYYGG LMGAYGHQQL | 150 |
GFRPYLGMPR ERTALPLDMA QEPVYVNAKQ YEGILRRRKA RAKAELERKV | 200 |
IRDRKPYLHE SRHKHAMRRA RASGGRFAKK SEVEAGEDAG GRDRERGSAT | 250 |
NSSGSEQVET DSNETLNSSG AP | 300 |