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| Locus | Common name | Short description |
| AT5G12840 | NF-YA1, ATHAP2A, HAP2A, EMB2220 | "nuclear factor Y, subunit A1", EMBRYO DEFECTIVE 2220, nuclear factor Y, subunit A1 (.1.2.3.4) |
>AT5G12840.4 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 399 |
| EcoRI | G|AATTC | 134, 545, 795 |
| NdeI | CA|TATG | 428 |
| StyI | C|C[AT][AT]GG | 572 |
Click here to view TAIR data
>AT5G12840.4 length:816
ATGCAATCAA AACCGGGAAG AGAAAACGAA GAGGAAGTCA ATAATCACCA | 50 |
TGCTGTTCAG CAGCCGATGA TGTATGCAGA GCCCTGGTGG AAAAACAACT | 100 |
CCTTTGGTGT TGTACCTCAA GCGAGACCTT CTGGAATTCC ATCAAATTCC | 150 |
TCTTCTTTGG ATTGCCCCAA TGGTTCCGAG TCAAACGATG TTCATTCAGC | 200 |
ATCTGAAGAC GGTGCGTTGA ATGGTGAAAA CGATGGCACT TGGAAGGATT | 250 |
CACAAGCTGC AACTTCCTCT CGTTCAGATA ATCACGGAAT GGAAGGAAAT | 300 |
GACCCAGCGC TCTCTATCCG TAACATGCAT GATCAGCCAC TTGTACAACC | 350 |
ACCAGAGCTT GTTGGACACT ATATCGCTTG TGTCCCAAAC CCATATCAGG | 400 |
ATCCATATTA TGGGGGATTG ATGGGAGCAT ATGGTCATCA GCAATTGGGT | 450 |
TTTCGTCCAT ATCTTGGAAT GCCTCGTGAA AGAACAGCTC TGCCACTTGA | 500 |
CATGGCACAA GAGCCCGTTT ATGTGAATGC AAAGCAGTAC GAGGGAATTC | 550 |
TAAGGCGAAG AAAAGCACGT GCCAAGGCAG AGCTAGAGAG GAAAGTCATC | 600 |
CGGGACAGAA AGCCATATCT TCACGAGTCA AGACACAAGC ATGCAATGAG | 650 |
AAGGGCACGA GCGAGTGGAG GCCGGTTTGC GAAGAAAAGT GAGGTAGAAG | 700 |
CGGGAGAGGA TGCAGGAGGG AGAGACAGAG AAAGGGGTTC AGCAACCAAC | 750 |
TCATCAGGCT CTGAACAAGT TGAGACAGAC TCTAATGAGA CCCTGAATTC | 800 |
TTCTGGTGCA CCATAA | 850 |
>AT5G12840.4 longest ORF length:271
MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS | 50 |
SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSDNHGMEGN | 100 |
DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG | 150 |
FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI | 200 |
RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN | 250 |
SSGSEQVETD SNETLNSSGA P | 300 |