Locus |
Common name |
Short description |
AT5G12870 |
ATMYB46 |
myb domain protein 46 (.1) |
>AT5G12870.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
730 |
HindIII
| A|AGCTT |
480 |
NdeI
| CA|TATG |
837 |
Click here to view TAIR data
>AT5G12870.1 length:843
ATGAGGAAGC CAGAGGTAGC CATTGCAGCT AGTACTCACC AAGTAAAGAA | 50 |
GATGAAGAAG GGACTTTGGT CTCCTGAGGA AGACTCAAAG CTGATGCAAT | 100 |
ACATGTTAAG CAATGGACAA GGATGTTGGA GTGATGTTGC GAAAAACGCA | 150 |
GGACTTCAAA GATGTGGCAA AAGCTGCCGT CTTCGTTGGA TCAACTATCT | 200 |
TCGTCCTGAC CTCAAGCGTG GCGCTTTCTC TCCTCAAGAA GAGGATCTCA | 250 |
TCATTCGCTT TCATTCCATC CTCGGCAACA GGTGGTCTCA GATTGCAGCA | 300 |
CGATTGCCTG GTCGGACCGA TAACGAGATC AAGAATTTCT GGAACTCAAC | 350 |
AATAAAGAAA AGGCTAAAGA AGATGTCCGA TACCTCCAAC TTAATCAACA | 400 |
ACTCATCCTC ATCACCCAAC ACAGCAAGCG ATTCCTCTTC TAATTCCGCA | 450 |
TCTTCTTTGG ATATTAAAGA CATTATAGGA AGCTTCATGT CCTTACAAGA | 500 |
ACAAGGCTTC GTCAACCCTT CCTTGACCCA CATACAAACC AACAATCCAT | 550 |
TTCCAACGGG AAACATGATC AGCCACCCGT GCAATGACGA TTTTACCCCT | 600 |
TATGTAGATG GTATCTATGG AGTAAACGCA GGGGTACAAG GGGAACTCTA | 650 |
CTTCCCACCT TTGGAATGTG AAGAAGGTGA TTGGTACAAT GCAAATATAA | 700 |
ACAACCACTT AGACGAGTTG AACACTAATG GATCCGGAAA CGCACCTGAG | 750 |
GGTATGAGAC CAGTGGAAGA ATTTTGGGAC CTTGACCAGT TGATGAACAC | 800 |
TGAGGTTCCT TCGTTTTACT TCAACTTCAA ACAAAGCATA TGA | 850 |
>AT5G12870.1 longest ORF length:280
MRKPEVAIAA STHQVKKMKK GLWSPEEDSK LMQYMLSNGQ GCWSDVAKNA | 50 |
GLQRCGKSCR LRWINYLRPD LKRGAFSPQE EDLIIRFHSI LGNRWSQIAA | 100 |
RLPGRTDNEI KNFWNSTIKK RLKKMSDTSN LINNSSSSPN TASDSSSNSA | 150 |
SSLDIKDIIG SFMSLQEQGF VNPSLTHIQT NNPFPTGNMI SHPCNDDFTP | 200 |
YVDGIYGVNA GVQGELYFPP LECEEGDWYN ANINNHLDEL NTNGSGNAPE | 250 |
GMRPVEEFWD LDQLMNTEVP SFYFNFKQSI | 300 |
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