fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G13080 ATWRKY75, WRKY75 ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY DNA-binding protein 75 (.1)

>AT5G13080.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NdeI CA|TATG 278
SacI GAGCT|C 90
StyI C|C[AT][AT]GG 256


Click here to view TAIR data

>AT5G13080.1 length:438
ATGGAGGGAT ATGATAATGG GTCGTTGTAT GCTCCTTTTT TGTCGTTGAA 
50
ATCTCATTCG AAACCAGAGC TGCATCAAGG CGAAGAAGAG AGCTCAAAGG 
100
TTAGATCAGA AGGTTGTTCG AAAAGCGTGG AGTCGTCGAA AAAGAAGGGG 
150
AAGAAACAAA GGTATGCGTT TCAAACAAGG AGCCAAGTGG ATATTCTTGA 
200
TGATGGTTAT CGATGGAGGA AATATGGCCA AAAGGCCGTC AAGAACAACA 
250
AGTTCCCTAG GAGTTACTAT AGGTGTACAT ATGGAGGATG CAATGTGAAG 
300
AAGCAAGTGC AAAGATTAAC AGTGGACCAA GAAGTGGTCG TGACAACCTA 
350
CGAAGGAGTG CATTCGCATC CCATCGAGAA ATCCACCGAA AACTTCGAGC 
400
ATATTCTCAC TCAAATGCAA ATCTACTCTT CTTTCTAG
450

>AT5G13080.1 longest ORF length:145
MEGYDNGSLY APFLSLKSHS KPELHQGEEE SSKVRSEGCS KSVESSKKKG 
50
KKQRYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTYGGCNVK 
100
KQVQRLTVDQ EVVVTTYEGV HSHPIEKSTE NFEHILTQMQ IYSSF
150