Locus |
Common name |
Short description |
AT5G13180 |
VNDIP2, ANAC083, VNI2 |
VND-interacting 2, NAC domain containing protein 83 (.1) |
>AT5G13180.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
707 |
SacI
| GAGCT|C |
663 |
StyI
| C|C[AT][AT]GG |
166 |
XbaI
| T|CTAGA |
310 |
Click here to view TAIR data
>AT5G13180.1 length:759
ATGGATAATG TCAAACTTGT TAAGAATGGT GTTTTGAGAT TGCCACCTGG | 50 |
ATTCAGATTC CATCCTACTG ATGAAGAACT TGTGGTTCAA TACCTTAAGA | 100 |
GGAAAGTTTG TTCTTCTCCT TTGCCAGCTT CAATCATCCC TGAGTTTGAT | 150 |
GTTTGCAGAG CTGATCCTTG GGATTTACCT GGCAATTTGG AGAAAGAGAG | 200 |
GTACTTCTTT AGCACAAGGG AAGCTAAATA CCCAAATGGG AACCGGTCTA | 250 |
ACCGGGCAAC TGGGTCTGGT TATTGGAAAG CTACCGGTAT TGATAAACGG | 300 |
GTTGTGACCT CTAGAGGAAA TCAAATCGTT GGTTTGAAGA AAACTCTTGT | 350 |
CTTCTACAAA GGCAAACCAC CTCATGGCTC AAGAACCGAT TGGATCATGC | 400 |
ACGAATATCG CCTCTCTTCT TCTCCTCCGA GTTCTATGGG TCCCACTCAG | 450 |
AACTGGGTAC TCTGTCGTAT CTTCTTGAAG AAAAGAGCCG GTAACAAGAA | 500 |
CGACGACGAC GACGGAGATA GCCGTAATCT TAGACATAAT AATAATAACA | 550 |
ATTCGAGTGA CCAAATTGAG ATAATTACAA CAGACCAAAC AGATGATAAA | 600 |
ACAAAACCAA TCTTCTTTGA TTTCATGAGA AAAGAAAGAA CAACAGATTT | 650 |
GAACCTTTTG CCGAGCTCTC CTTCTTCCGA TCATGCTTCA AGTGGAGTCA | 700 |
CGACGGAGAT CTTCTCTTCT TCCGATGAAG AGACCAGTAG TTGCAATAGT | 750 |
TTCAGATGA | 800 |
>AT5G13180.1 longest ORF length:252
MDNVKLVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVCSSP LPASIIPEFD | 50 |
VCRADPWDLP GNLEKERYFF STREAKYPNG NRSNRATGSG YWKATGIDKR | 100 |
VVTSRGNQIV GLKKTLVFYK GKPPHGSRTD WIMHEYRLSS SPPSSMGPTQ | 150 |
NWVLCRIFLK KRAGNKNDDD DGDSRNLRHN NNNNSSDQIE IITTDQTDDK | 200 |
TKPIFFDFMR KERTTDLNLL PSSPSSDHAS SGVTTEIFSS SDEETSSCNS | 250 |
FR | 300 |
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