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| Locus | Common name | Short description |
| AT5G13330 | RAP2.6L | related to AP2 6l (.1) |
>AT5G13330.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstYI, BstZ17I, Bsu36I, BtsI, Cac8I, ClaI, DraI, DraIII, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SapI, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, XbaI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 486 |
| AccII(FnuDII) | CG|CG | 161 |
| AciI | C|CGC | 6, 41, 160 |
| AflIII | A|CPuPyGT | 482 |
| AluI | AG|CT | 57, 217, 238, 558 |
| ApoI | Pu|AATTPy | 250 |
| AvaI | C|PyCGPuG | 193 |
| AvaII | G|G[AT]CC | 290, 375 |
| BalI | TGG|CCA | 403 |
| BanI | G|GPyPuCC | 259 |
| BsaBI | GATNN|NNATC | 77 |
| BsaJI | C|CNNGG | 136, 263, 294 |
| BslI | CCNNNNN|NNGG | 187, 287, 372 |
| BsoBI | C|PyCGPuG | 193 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 259 |
| BsrFI | Pu|CCGGPy | 45 |
| BssKI | |CCNGG | 372, 419 |
| BstNI | CC|[AT]GG | 372, 419 |
| BstUI | CG|CG | 161 |
| BtgI | C|CPuPyGG | 136 |
| BtrI | CAC|GTC | 483 |
| Cfr10I | [AG]|CCGG[TC] | 45 |
| DdeI | C|TNAG | 12, 439 |
| DpnI | GA-CH3|TC | 71, 92, 164 |
| DpnII | |GATC | 71, 92, 164 |
| DrdI | GACNNNN|NNGTC | 46 |
| EaeI | Py|GGCCPu | 403 |
| EcoO109I | PuG|GNCCPy | 298 |
| Fnu4HI | GC|NGC | 150, 177, 219, 240, 548, 557, 578 |
| HaeIII | GG|CC | 296, 402 |
| HincII | GTPy|PuAC | 486, 500 |
| HinfI | G|ANTC | 29, 345, 488 |
| HpaII | C|CGG | 44 |
| Hpy188I | TCN|GA | 32, 69 |
| Hpy99I | CG[AT]CG| | 484 |
| HpyCH4IV | A|CGT | 482 |
| HpyCH4V | TG|CA | 325 |
| MboI | |GATC | 71, 92, 164 |
| MscI | TGG|CCA | 403 |
| MspI | C|CGG | 44 |
| MwoI | GCNNNNN|NNGC | 216, 554 |
| NcoI | C|CATGG | 136 |
| NlaIII | CATG| | 135, 323, 349 |
| NlaIV | GGN|NCC | 259, 290 |
| PflFI | GACN|NNGTC | 374 |
| PsiI | TTA|TAA | 414, 618 |
| PspGI | |CC[AT]GG | 372, 419 |
| SalI | G|TCGAC | 486 |
| Sau3AI | |GATC | 71, 92, 164 |
| Sau96I | G|GNCC | 290, 297, 375 |
| ScrFI | CC|NGG | 372, 419 |
| SexAI | A|CC[AT]GGT | 373 |
| SfcI | C|TPuPyAG | 114 |
| StyI | C|C[AT][AT]GG | 136, 263, 294 |
| Taqƒ¿I | T|CGA | 201, 367, 485 |
| TfiI | G|A[AT]TC | 29, 345 |
| TseI | G|C[AT]GC | 177, 219, 240, 548, 557, 578 |
| Tsp509I | |AATT | 249, 599, 611 |
| Tth111I | GACN|NNGTC | 374 |
| XcmI | CCANNNNN|NNNNTGG | 145 |
Click here to view TAIR data
>AT5G13330.1 length:639
ATGGTCTCCG CTCTCAGCCG TGTCATAGAG AATCCGACAG ACCCGCCGGT | 50 |
CAAACAAGAG CTTGATAAAT CGGATCAACA TCAACCAGAC CAAGATCAAC | 100 |
CAAGAAGAAG ACACTATAGA GGCGTAAGGC AGAGACCATG GGGTAAATGG | 150 |
GCGGCAGAAA TCCGCGATCC AAAGAAAGCA GCCCGTGTCT GGCTCGGGAC | 200 |
TTTCGAGACG GCAGAGGAAG CTGCTTTAGC CTATGACCGA GCTGCCCTCA | 250 |
AATTCAAAGG CACCAAGGCT AAACTGAACT TCCCTGAACG GGTCCAAGGC | 300 |
CCTACTACCA CCACAACCAT TTCTCATGCA CCAAGAGGAG TTAGTGAATC | 350 |
CATGAACTCA CCTCCTCCTC GACCTGGTCC ACCTTCAACT ACTACTACTT | 400 |
CGTGGCCAAT GACTTATAAC CAGGACATAC TTCAATACGC TCAGTTGCTT | 450 |
ACGAGTAACA ATGAGGTTGA TTTATCATAC TACACGTCGA CTCTCTTCAG | 500 |
TCAACCTTTT TCAACGCCTT CTTCATCTTC TTCTTCCTCC CAACAGACGC | 550 |
AGCAACAGCA GCTACAACAA CAACAACAGC AGCGTGAAGA AGAAGAGAAG | 600 |
AATTATGGTT ACAATTATTA TAACTACCCA AGAGAATAA | 650 |
>AT5G13330.1 longest ORF length:212
MVSALSRVIE NPTDPPVKQE LDKSDQHQPD QDQPRRRHYR GVRQRPWGKW | 50 |
AAEIRDPKKA ARVWLGTFET AEEAALAYDR AALKFKGTKA KLNFPERVQG | 100 |
PTTTTTISHA PRGVSESMNS PPPRPGPPST TTTSWPMTYN QDILQYAQLL | 150 |
TSNNEVDLSY YTSTLFSQPF STPSSSSSSS QQTQQQQLQQ QQQQREEEEK | 200 |
NYGYNYYNYP RE | 250 |