Locus |
Common name |
Short description |
AT5G13910 |
LEAFY PETIOLE (LEP) |
LEAFY PETIOLE, Integrase-type DNA-binding superfamily protein (.1) |
>AT5G13910.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
435, 498 |
PvuII
| CAG|CTG |
95 |
StyI
| C|C[AT][AT]GG |
79, 167 |
Click here to view TAIR data
>AT5G13910.1 length:636
ATGAACACAA CATCATCAAA GAGCAAGAAG AAGCAAGACG ATCAGGTTGG | 50 |
TACAAGGTTT CTTGGGGTGA GAAGAAGGCC TTGGGGAAGA TACGCAGCTG | 100 |
AGATTAGAGA CCCAACTACG AAGGAGCGTC ACTGGCTTGG CACTTTCGAT | 150 |
ACGGCGGAAG AAGCTGCCTT GGCCTACGAT AGAGCTGCTC GGTCCATGCG | 200 |
TGGCACACGT GCCAGAACCA ACTTTGTTTA CTCAGACATG CCTCCTTCCT | 250 |
CATCCGTCAC CTCCATTGTT TCTCCTGACG ATCCTCCTCC TCCTCCACCT | 300 |
CCTCCTGCTC CTCCTAGCAA TGATCCTGTC GATTACATGA TGATGTTTAA | 350 |
CCAATACTCA TCCACTGACT CGCCAATGCT TCAGCCTCAT TGTGATCAAG | 400 |
TGGACAGTTA CATGTTTGGT GGCTCTCAAT CTTCGAATTC TTATTGCTAT | 450 |
TCTAATGACA GTAGTAATGA GCTGCCTCCT CTCCCGAGCG ACTTGTCGAA | 500 |
TTCGTGTTAT AGCCAACCAC AGTGGACCTG GACCGGTGAC GACTACTCGT | 550 |
CTGAGTACGT ACATAGTCCA ATGTTCAGCA GAATGCCTCC GGTTTCTGAC | 600 |
TCTTTCCCTC AAGGTTTCAA CTACTTTGGC TCCTAA | 650 |
>AT5G13910.1 longest ORF length:211
MNTTSSKSKK KQDDQVGTRF LGVRRRPWGR YAAEIRDPTT KERHWLGTFD | 50 |
TAEEAALAYD RAARSMRGTR ARTNFVYSDM PPSSSVTSIV SPDDPPPPPP | 100 |
PPAPPSNDPV DYMMMFNQYS STDSPMLQPH CDQVDSYMFG GSQSSNSYCY | 150 |
SNDSSNELPP LPSDLSNSCY SQPQWTWTGD DYSSEYVHSP MFSRMPPVSD | 200 |
SFPQGFNYFG S | 250 |
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