fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G14140 zinc ion binding;nucleic acid binding;zinc ion binding (.1)

>AT5G14140.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HindIII, KpnI, NdeI, NheI, NotI, PacI, SacI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 158, 962
EcoRI G|AATTC 721
EcoRV GAT|ATC 138
HpaI GTT|AAC 42
NcoI C|CATGG 830, 933
PstI CTGCA|G 986, 1081
PvuII CAG|CTG 989
SalI G|TCGAC 926
StyI C|C[AT][AT]GG 830, 933
XhoI C|TCGAG 19


Click here to view TAIR data

>AT5G14140.1 length:1284
ATGAGTTTTG TTAAGAAACT CGAGTTTAAA AATATAGTGG TGTTAACCAA 
50
TGAGGTAGTG GTAAATCTCT CAAGTGAAGA TATAAAAGAA AAAGAAAATG 
100
GTGTTTCTTA TACGTGGGCC TTCTTTGGGC CGAACAAGAT ATCATATAGT 
150
CCAGGAAGGA TCCAGTTAAT AAACCGGAGC GGAGGAAATG TTCAGTTGGA 
200
TACTTGTTTC ATGTTTGTGA GACCGATGGC TACGGGTATG GCGGTAGATA 
250
CGGTAGGCGA GTTAGGCTTT CCGTACTGGA ACCCAATCCG ACGAAGATTT 
300
CCTCCGGATT CGCCGTTCTT TGCATCTGGA AATGTCGAGC GCGAGCTACT 
350
TGCTAAACAG GTGACATTGG ACTTCACAGA AGATGAAATC AACCATCTGC 
400
ATAAATTTGT GGAAATTGAA ACCAGAAGAA TCTCGTGTCC CATTGTTGGC 
450
TGTCCTGAAC GCCTGAAATC TTTGGACCAT TTTGAAGATC ACTATAATGC 
500
ACGGCACACT GCCTCTTGTT CAGTGTGCTC AAGGGTCTAC CCTACTTCTC 
550
GCTTACTAAG TATTCACATA TCCGAAGCAC ACGACTCTTT CTTTCAAGCT 
600
AAAGTTTCTC GGGGTTATGA CATGTATGAG TGCCTTGTGG AAGGGTGTGG 
650
ATTGAAGTTC AAGACCTACA AAGCCCGGCA TCGACACTTG ATTGACAAAC 
700
ACAAGTTCCC AACGACATTT GAATTCTTCA AGAAGACCCA ACTCTCAAAG 
750
AAGCGTAGAG AGAAACTTCA AAGGCAACAT GTATCAAAGC TGAAACATGA 
800
AGAAGACAAA GAAGCTGCTT CGTCAGATGC CATGGAAGTA GAAGACAAAG 
850
GCAGCTTAGA CGGTCTTGTT TCAGCACTGT CCTCGCTAAC TACCTCAGAC 
900
ACAACTCCTT CGAATGTCAG CTTCGGTCGA CGCCATGGTC GTGGGCTGAC 
950
CTTTGTTCCA CGGATCCCTA TTAATTCTAA AGTGGCTGCA GCTGTCGATG 
1000
GCGACGGCTG GATTTTGCCA TCGCCGAGAT CAAGCAATGC GCTAGAGCTT 
1050
CATGTTTTCC TTACAACATT ACATCTACCT CTGCAGCCCC TTGATGAGGA 
1100
CTCTTATGTT TGGAAACTTG TCGCTCAAGC GGTAATCTAT GCTATTTGGA 
1150
AGCAGAGAAA CAACTTCATT CACAACCAGC AATCAATCCC TGCTGCTTGG 
1200
GTGTTTAAGA CCATTGACCG TGAGATGAGA TCATTGACAC CATCAATGCG 
1250
AGGCGGCACC GGAAGAAGTT CAGAAACCTT ATAA
1300

>AT5G14140.1 longest ORF length:427
MSFVKKLEFK NIVVLTNEVV VNLSSEDIKE KENGVSYTWA FFGPNKISYS 
50
PGRIQLINRS GGNVQLDTCF MFVRPMATGM AVDTVGELGF PYWNPIRRRF 
100
PPDSPFFASG NVERELLAKQ VTLDFTEDEI NHLHKFVEIE TRRISCPIVG 
150
CPERLKSLDH FEDHYNARHT ASCSVCSRVY PTSRLLSIHI SEAHDSFFQA 
200
KVSRGYDMYE CLVEGCGLKF KTYKARHRHL IDKHKFPTTF EFFKKTQLSK 
250
KRREKLQRQH VSKLKHEEDK EAASSDAMEV EDKGSLDGLV SALSSLTTSD 
300
TTPSNVSFGR RHGRGLTFVP RIPINSKVAA AVDGDGWILP SPRSSNALEL 
350
HVFLTTLHLP LQPLDEDSYV WKLVAQAVIY AIWKQRNNFI HNQQSIPAAW 
400
VFKTIDREMR SLTPSMRGGT GRSSETL
450