fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G14340 AtMYB40 myb domain protein 40 (.1)

>AT5G14340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 363, 732
EcoRV GAT|ATC 621
NcoI C|CATGG 46, 745
StyI C|C[AT][AT]GG 46, 745


Click here to view TAIR data

>AT5G14340.1 length:792
ATGGGGAGAA AACCGTGCTG TGACAAAATT GGATTGAAGA GAGGTCCATG 
50
GACTATAGAA GAAGATCATA GACTCATGAA CTTCATTCTT AACAATGGCA 
100
TCCACTGCTG GAGAATTGTC CCCAAACTCG CAGGTTTGTT GAGATGCGGG 
150
AAGAGCTGTA GATTGAGATG GATCAATTAT TTGAGACCCG ATCTCAAGAG 
200
AGGTGGTTTC ACTGATGCTG AAGAAGATCG GATTATGGAA CTTCACTCTC 
250
AACTTGGCAA CCGGTGGTCT AAAATTGCCT CGCATTTCTC TGGTCGAACG 
300
GATAACGAGA TCAAAAACCA CTGGAATACG AAGATCAAGA AGAAGATGAA 
350
ACATCTTGGG TTGGATCCGG CTACGCACAA ACCGATGAAT GATATTACTC 
400
ATCAAACCGA TCCTAATCAA GATAAAAAAC CAAATATGTG TTCTACCATC 
450
AATGAAGGAG AAGAGATCAA GGATCAAACT CCAAAAGATG ATGTTATCAC 
500
AGAAACAACA AAAACATTAA TGTTATCTGA TAATGATGAG GAACTTGTGG 
550
CGAAAAACTG CAAAATTCTA TGTGCAGAAG AAGTAGACTT GGAATCTCTA 
600
TTTGAAACGC AATGCAATGA GATATCCTCT TCGTCTTTCT CTTCACTATG 
650
TAGTAATATT TCAAGAAGTG AATCTTCATC ATATCTTGCA GAAGATTCGA 
700
TCTCTTTAGA GCAATGGGAC TTGGATATGA CGGATCCTTT TGTACCATGG 
750
GACCTCTTCG CCAATCTTGA TGATAATCTT TTCCTCTTAT GA
800

>AT5G14340.1 longest ORF length:263
MGRKPCCDKI GLKRGPWTIE EDHRLMNFIL NNGIHCWRIV PKLAGLLRCG 
50
KSCRLRWINY LRPDLKRGGF TDAEEDRIME LHSQLGNRWS KIASHFSGRT 
100
DNEIKNHWNT KIKKKMKHLG LDPATHKPMN DITHQTDPNQ DKKPNMCSTI 
150
NEGEEIKDQT PKDDVITETT KTLMLSDNDE ELVAKNCKIL CAEEVDLESL 
200
FETQCNEISS SSFSSLCSNI SRSESSSYLA EDSISLEQWD LDMTDPFVPW 
250
DLFANLDDNL FLL
300