Locus |
Common name |
Short description |
AT5G14340 |
AtMYB40 |
myb domain protein 40 (.1) |
>AT5G14340.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
363, 732 |
EcoRV
| GAT|ATC |
621 |
NcoI
| C|CATGG |
46, 745 |
StyI
| C|C[AT][AT]GG |
46, 745 |
Click here to view TAIR data
>AT5G14340.1 length:792
ATGGGGAGAA AACCGTGCTG TGACAAAATT GGATTGAAGA GAGGTCCATG | 50 |
GACTATAGAA GAAGATCATA GACTCATGAA CTTCATTCTT AACAATGGCA | 100 |
TCCACTGCTG GAGAATTGTC CCCAAACTCG CAGGTTTGTT GAGATGCGGG | 150 |
AAGAGCTGTA GATTGAGATG GATCAATTAT TTGAGACCCG ATCTCAAGAG | 200 |
AGGTGGTTTC ACTGATGCTG AAGAAGATCG GATTATGGAA CTTCACTCTC | 250 |
AACTTGGCAA CCGGTGGTCT AAAATTGCCT CGCATTTCTC TGGTCGAACG | 300 |
GATAACGAGA TCAAAAACCA CTGGAATACG AAGATCAAGA AGAAGATGAA | 350 |
ACATCTTGGG TTGGATCCGG CTACGCACAA ACCGATGAAT GATATTACTC | 400 |
ATCAAACCGA TCCTAATCAA GATAAAAAAC CAAATATGTG TTCTACCATC | 450 |
AATGAAGGAG AAGAGATCAA GGATCAAACT CCAAAAGATG ATGTTATCAC | 500 |
AGAAACAACA AAAACATTAA TGTTATCTGA TAATGATGAG GAACTTGTGG | 550 |
CGAAAAACTG CAAAATTCTA TGTGCAGAAG AAGTAGACTT GGAATCTCTA | 600 |
TTTGAAACGC AATGCAATGA GATATCCTCT TCGTCTTTCT CTTCACTATG | 650 |
TAGTAATATT TCAAGAAGTG AATCTTCATC ATATCTTGCA GAAGATTCGA | 700 |
TCTCTTTAGA GCAATGGGAC TTGGATATGA CGGATCCTTT TGTACCATGG | 750 |
GACCTCTTCG CCAATCTTGA TGATAATCTT TTCCTCTTAT GA | 800 |
>AT5G14340.1 longest ORF length:263
MGRKPCCDKI GLKRGPWTIE EDHRLMNFIL NNGIHCWRIV PKLAGLLRCG | 50 |
KSCRLRWINY LRPDLKRGGF TDAEEDRIME LHSQLGNRWS KIASHFSGRT | 100 |
DNEIKNHWNT KIKKKMKHLG LDPATHKPMN DITHQTDPNQ DKKPNMCSTI | 150 |
NEGEEIKDQT PKDDVITETT KTLMLSDNDE ELVAKNCKIL CAEEVDLESL | 200 |
FETQCNEISS SSFSSLCSNI SRSESSSYLA EDSISLEQWD LDMTDPFVPW | 250 |
DLFANLDDNL FLL | 300 |
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