| Locus |
Common name |
Short description |
| AT5G15150 |
ATHB3, HAT7, ATHB-3 |
HOMEOBOX FROM ARABIDOPSIS THALIANA 7, homeobox 3 (.1) |
>AT5G15150.1 CDS map
>>Show genomic map

Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TspRI, Tth111I, XbaI, XcmI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AatII
| GACGT|C |
876 |
| AccII(FnuDII)
| CG|CG |
778, 784 |
| AciI
| C|CGC |
777, 783 |
| AhdI
| GACNNN|NNGTC |
318 |
| AluI
| AG|CT |
386, 393, 405, 429, 490, 510, 670 |
| ApoI
| Pu|AATTPy |
357, 661 |
| AvaI
| C|PyCGPuG |
514 |
| AvrII
| C|CTAGG |
457 |
| BclI
| T|GATCA |
276, 746, 810 |
| BfaI
| C|TAG |
395, 456, 492, 882 |
| BglII
| A|GATCT |
753 |
| BsaBI
| GATNN|NNATC |
230, 833 |
| BsaHI
| GPu|CGPyC |
876 |
| BsaJI
| C|CNNGG |
457 |
| BsiEI
| CGPuPy|CG |
630, 782 |
| BslI
| CCNNNNN|NNGG |
78 |
| BsoBI
| C|PyCGPuG |
514 |
| BssKI
| |CCNGG |
284 |
| BstNI
| CC|[AT]GG |
284 |
| BstUI
| CG|CG |
778, 784 |
| BstYI
| Pu|GATCPy |
753 |
| Cac8I
| GCN|NGC |
432 |
| DdeI
| C|TNAG |
51, 436, 604 |
| DpnI
| GA-CH3|TC |
198, 224, 275, 649, 745, 752, 769, 774, 809, 827, 833 |
| DpnII
| |GATC |
198, 224, 275, 649, 745, 752, 769, 774, 809, 827, 833 |
| EcoRI
| G|AATTC |
661 |
| Fnu4HI
| GC|NGC |
428, 452, 509, 908 |
| HaeIII
| GG|CC |
64, 897 |
| HindIII
| A|AGCTT |
671 |
| HinfI
| G|ANTC |
528, 570, 639 |
| Hpy188I
| TCN|GA |
222, 309, 479, 561, 723, 772, 815 |
| Hpy99I
| CG[AT]CG| |
874 |
| HpyCH4III
| ACN|GT |
542, 631 |
| HpyCH4IV
| A|CGT |
875 |
| HpyCH4V
| TG|CA |
426, 450, 466, 845 |
| MboI
| |GATC |
198, 224, 275, 649, 745, 752, 769, 774, 809, 827, 833 |
| MfeI
| C|AATTG |
939 |
| MwoI
| GCNNNNN|NNGC |
458, 905 |
| NdeI
| CA|TATG |
325 |
| NlaIII
| CATG| |
77, 85, 101, 187, 268, 599, 675, 734, 742, 894 |
| NlaIV
| GGN|NCC |
411 |
| NspI
| PuCATG|Py |
600 |
| PaeR7I
| C|TCGAG |
514 |
| PspGI
| |CC[AT]GG |
284 |
| Sau3AI
| |GATC |
198, 224, 275, 649, 745, 752, 769, 774, 809, 827, 833 |
| ScrFI
| CC|NGG |
284 |
| SexAI
| A|CC[AT]GGT |
285 |
| SmlI
| C|TPyPuAG |
514 |
| StyI
| C|C[AT][AT]GG |
457 |
| Taqƒ¿I
| T|CGA |
390, 513, 546, 767 |
| TfiI
| G|A[AT]TC |
528, 570, 639 |
| TliI
| C|TCGAG |
514 |
| TseI
| G|C[AT]GC |
428, 452, 509, 908 |
| Tsp45I
| |GT[CG]AC |
320 |
| Tsp509I
| |AATT |
356, 660, 938 |
| XhoI
| C|TCGAG |
514 |
| XmnI
| GAANN|NNTTC |
388 |
Click here to view TAIR data
>AT5G15150.1 length:945
ATGTATATGT ATGAGGAGGA AAGGAACAAT ATCAATAATA ATCAAGAAGG | 50 |
ACTGAGATTG GAGATGGCCT TTCCTCAACA TGGCTTCATG TTTCAGCAAC | 100 |
TCCATGAAGA CAATGCTCAT CACTTACCTT CCCCAACCTC TCTCCCCTCT | 150 |
TGTCCTCCTC ATCTCTTCTA TGGAGGAGGA GGAAACTACA TGATGAACAG | 200 |
ATCAATGTCG TTCACGGGAG TATCAGATCA TCATCATCTA ACTCAAAAAA | 250 |
GCCCGACAAC AACGAACAAC ATGAATGATC AAGACCAGGT AGGCGAGGAA | 300 |
GACAACCTAT CAGACGATGG GTCACATATG ATGTTAGGAG AGAAGAAGAA | 350 |
GAGGCTGAAT TTAGAGCAAG TTAGGGCATT AGAGAAGAGC TTCGAGCTAG | 400 |
GGAACAAGCT GGAGCCAGAG AGGAAGATGC AGCTTGCTAA GGCTTTAGGA | 450 |
TTGCAGCCTA GGCAGATTGC AATATGGTTT CAGAACAGGA GAGCTAGGTG | 500 |
GAAGACAAAG CAGCTCGAGA GAGACTATGA TTCTCTCAAA AAACAGTTCG | 550 |
ATGTTTTGAA ATCGGACAAT GATTCTCTTC TTGCCCACAA CAAGAAACTA | 600 |
CATGCTGAGT TAGTGGCATT GAAGAAACAC GACCGTAAAG AATCAGCAAA | 650 |
GATCAAGAGA GAATTCGCAG AAGCTTCATG GAGCAACAAT GGAAGCACAG | 700 |
AAAATAATCA TAACAATAAT AGTTCAGACG CTAATCATGT GAGCATGATC | 750 |
AAAGATCTTT TCCCTTCTTC GATCCGATCC GCGACCGCGA CCACGACCTC | 800 |
TACCCATATT GATCATCAGA TTGTTCAAGA TCAAGATCAA GGGTTTTGCA | 850 |
ATATGTTCAA TGGTATTGAT GAAACGACGT CGGCTAGTTA TTGGGCATGG | 900 |
CCTGACCAGC AGCAACAACA TCACAATCAT CATCAGTTCA ATTGA | 950 |
>AT5G15150.1 longest ORF length:314
MYMYEEERNN INNNQEGLRL EMAFPQHGFM FQQLHEDNAH HLPSPTSLPS | 50 |
CPPHLFYGGG GNYMMNRSMS FTGVSDHHHL TQKSPTTTNN MNDQDQVGEE | 100 |
DNLSDDGSHM MLGEKKKRLN LEQVRALEKS FELGNKLEPE RKMQLAKALG | 150 |
LQPRQIAIWF QNRRARWKTK QLERDYDSLK KQFDVLKSDN DSLLAHNKKL | 200 |
HAELVALKKH DRKESAKIKR EFAEASWSNN GSTENNHNNN SSDANHVSMI | 250 |
KDLFPSSIRS ATATTTSTHI DHQIVQDQDQ GFCNMFNGID ETTSASYWAW | 300 |
PDQQQQHHNH HQFN | 350 |
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