Locus |
Common name |
Short description |
AT5G15840 |
FG, CO |
CONSTANS, B-box type zinc finger protein with CCT domain (.1.2) |
>AT5G15840.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
600 |
StyI
| C|C[AT][AT]GG |
443 |
XhoI
| C|TCGAG |
549 |
Click here to view TAIR data
>AT5G15840.2 length:825
ATGTTGAAAC AAGAGAGTAA CGACATAGGT AGTGGAGAGA ACAACAGGGC | 50 |
ACGACCCTGT GACACATGCC GGTCAAACGC CTGCACCGTG TATTGCCATG | 100 |
CAGATTCTGC CTACTTGTGC ATGAGCTGTG ATGCTCAAGT TCACTCTGCC | 150 |
AATCGCGTTG CTTCCCGCCA TAAACGTGTC CGGGTCTGCG AGTCATGTGA | 200 |
GCGTGCTCCG GCTGCTTTTT TGTGTGAGGC AGATGATGCC TCTCTATGCA | 250 |
CAGCCTGTGA TTCAGAGGTT CATTCTGCAA ACCCACTTGC TAGACGCCAT | 300 |
CAGCGAGTTC CAATTCTACC AATTTCTGGA AACTCTTTCA GCTCCATGAC | 350 |
CACTACTCAC CACCAAAGCG AGAAAACAAT GACCGATCCA GAGAAGAGAC | 400 |
TGGTGGTGGA TCAAGAGGAA GGTGAAGAAG GTGATAAGGA TGCCAAGGAG | 450 |
GTTGCTTCGT GGCTGTTCCC TAATTCAGAC AAAAATAACA ATAACCAAAA | 500 |
CAATGGGTTA TTGTTTAGTG ATGAGTATCT AAACCTTGTG GATTACAACT | 550 |
CGAGTATGGA CTACAAATTC ACAGGTGAAT ACAGTCAACA CCAACAAAAC | 600 |
TGCAGCGTAC CACAGACGAG CTACGGGGGA GATAGAGTTG TTCCGCTTAA | 650 |
ACTTGAAGAA TCAAGGGGCC ACCAGTGCCA TAACCAACAG AATTTTCAGT | 700 |
TCAATATCAA ATATGGCTCC TCAGGGACTC ACTACAACGA CAATGGTTCC | 750 |
ATTAACCATA ACGTAAGGCT TTTGTATATT TGTTACCCCT TCAATTTAGC | 800 |
ATCTTCCCAT AACGCAGCAG GGTGA | 850 |
>AT5G15840.2 longest ORF length:274
MLKQESNDIG SGENNRARPC DTCRSNACTV YCHADSAYLC MSCDAQVHSA | 50 |
NRVASRHKRV RVCESCERAP AAFLCEADDA SLCTACDSEV HSANPLARRH | 100 |
QRVPILPISG NSFSSMTTTH HQSEKTMTDP EKRLVVDQEE GEEGDKDAKE | 150 |
VASWLFPNSD KNNNNQNNGL LFSDEYLNLV DYNSSMDYKF TGEYSQHQQN | 200 |
CSVPQTSYGG DRVVPLKLEE SRGHQCHNQQ NFQFNIKYGS SGTHYNDNGS | 250 |
INHNVRLLYI CYPFNLASSH NAAG | 300 |
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