fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G16470 zinc finger (C2H2 type) family protein (.1)

>AT5G16470.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 40


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>AT5G16470.1 length:315
ATGACAGGCA AAGCAAAGCC AAAGAAGCAC ACAGCGAAGG AGCTCCAAGC 
50
TAAAGCCGAT GCAGCGTTGA CCAATCGCGG TGGAGGAAAG GCAGGGCTCG 
100
CCGATAGAAC CGGTAAGGAG AAAGGTGGTC ACGCAAAGTA CGAGTGTCCT 
150
CACTGCAAGA TCACTGTACC GGATCTAAAG ACGATGCAGA TCCATCATGA 
200
ATCGAAGCAT CCAAAGCTGA CTTATGAAGA GCCGAGGAAT CTTCATGAGG 
250
CTTTAGCTGC TCCTGCTGAA TCATCTAAGC CTAAGCCTGG AATCAGAGGA 
300
AGCCTTAAGA AGTGA
350

>AT5G16470.1 longest ORF length:104
MTGKAKPKKH TAKELQAKAD AALTNRGGGK AGLADRTGKE KGGHAKYECP 
50
HCKITVPDLK TMQIHHESKH PKLTYEEPRN LHEALAAPAE SSKPKPGIRG 
100
SLKK
150