fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G16770 ATMYB9 myb domain protein 9 (.1.2)

>AT5G16770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 611
NcoI C|CATGG 46, 99, 916, 991
PvuII CAG|CTG 105
SacI GAGCT|C 113
StyI C|C[AT][AT]GG 46, 99, 916, 991


Click here to view TAIR data

>AT5G16770.1 length:1011
ATGGGGCGAT CACCATGTTG CGATGAGAAT GGTCTAAAGA AAGGGCCATG 
50
GACACAAGAG GAGGATGATA AACTGATAGA TCACATTCAA AAACATGGCC 
100
ATGGCAGCTG GAGAGCTCTT CCAAAGCAAG CCGGTTTAAA CCGATGCGGA 
150
AAGAGTTGTA GATTAAGATG GACCAACTAC TTGAGACCTG ACATCAAGAG 
200
AGGAAATTTC ACTGAAGAGG AAGAACAAAC TATTATCAAC CTCCATTCCC 
250
TTCTTGGAAA CAAGTGGTCG TCGATAGCCG GTAATCTTCC TGGAAGAACG 
300
GACAATGAAA TAAAAAACTA TTGGAACACA CATTTGAGAA AGAAACTTCT 
350
CCAAATGGGG ATTGATCCGG TGACCCATAG GCCAAGAACC GACCATCTAA 
400
ACGTTTTAGC AGCTCTCCCG CAGCTTATAG CCGCCGCAAA TTTCAACAGC 
450
CTCTTGAATC TCAACCAAAA TGTGCAACTG GATGCAACAA CTCTTGCTAA 
500
AGCTCAACTG CTACACACTA TGATTCAAGT CCTTAGCACC AATAACAACA 
550
CCACCAATCC TTCTTTTTCT TCATCAACTA TGCAAAACAG TAACACCAAT 
600
CTCTTTGGCC AAGCTTCTTA CTTAGAGAAC CAAAATCTTT TTGGTCAGTC 
650
TCAAAACTTC TCTCACATTC TTGAGGATGA GAATTTGATG GTCAAAACCC 
700
AAATTATTGA TAACCCTTTG GACTCTTTTT CTTCCCCCAT ACAACCCGGT 
750
TTTCAAGATG ATCATAATTC ACTCCCTCTA TTGGTTCCGG CGTCTCCTGA 
800
AGAATCTAAA GAAACTCAAA GGATGATCAA GAACAAAGAC ATCGTCGATT 
850
ACCATCATCA TGATGCTTCA AACCCTTCAT CATCAAACTC AACGTTTACA 
900
CAAGATCATC ATCACCCATG GTGTGACACT ATTGATGATG GAGCAAGTGA 
950
TTCTTTTTGG AAAGAGATAA TAGAGCAAAC TTGTTCGGAA CCATGGCCAT 
1000
TTCCTGAATA G
1050

>AT5G16770.1 longest ORF length:336
MGRSPCCDEN GLKKGPWTQE EDDKLIDHIQ KHGHGSWRAL PKQAGLNRCG 
50
KSCRLRWTNY LRPDIKRGNF TEEEEQTIIN LHSLLGNKWS SIAGNLPGRT 
100
DNEIKNYWNT HLRKKLLQMG IDPVTHRPRT DHLNVLAALP QLIAAANFNS 
150
LLNLNQNVQL DATTLAKAQL LHTMIQVLST NNNTTNPSFS SSTMQNSNTN 
200
LFGQASYLEN QNLFGQSQNF SHILEDENLM VKTQIIDNPL DSFSSPIQPG 
250
FQDDHNSLPL LVPASPEESK ETQRMIKNKD IVDYHHHDAS NPSSSNSTFT 
300
QDHHHPWCDT IDDGASDSFW KEIIEQTCSE PWPFPE
350