fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G17260 ANAC086 NAC domain containing protein 86 (.1)

>AT5G17260.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 576, 1032
HindIII A|AGCTT 702
KpnI GGTAC|C 1245
NcoI C|CATGG 142
NdeI CA|TATG 443
SacI GAGCT|C 534
StyI C|C[AT][AT]GG 142, 490
XhoI C|TCGAG 555


Click here to view TAIR data

>AT5G17260.1 length:1431
ATGGCTCCGG TCTCGTTGCC TCCAGGTTTT AGGTTCCATC CAACGGACGA 
50
AGAACTAATC ACTTACTATC TCAAGAGAAA GATCAACGGC CAAGAGATCG 
100
AGCTAGAGAT TATCCCTGAA GTAGACCTCT ACAAGTGCGA ACCATGGGAC 
150
TTGCCAGGGA AGTCACTGAT TCCTAGCAAA GACCAAGAAT GGTTCTTCTT 
200
CAGCCCACGG GACAGAAAGT ACCCCAATGG TTCAAGGACA AACCGGGCAA 
250
CAAAAGGCGG TTATTGGAAA GCCACAGGCA AAGACCGGCG GGTGAGTTGG 
300
AGAGATCGAG CCATTGGGAC CAAGAAAACA TTAGTTTACT ACCGTGGACG 
350
TGCCCCGCAT GGTATTAGAA CTGGTTGGGT CATGCATGAA TATCGCCTCG 
400
ATGAATCCGA ATGCGAGCCT TCTGCATTTG GCATGCAGGA CGCATATGCA 
450
CTCTGTCGCG TGTTTAAGAA AATAGTGATT GAGGCGAAAC CAAGGGATCA 
500
ACATCAGCAG CAGCATCAAC CTTACGTCCA CACGAGCTCG AATATAAGTG 
550
GTAGCTCGAG TTTTGACGTT TGTTCAGATC TTGAAATAAG TTCAAACACA 
600
CCTTATAATA CCGCTGCCCA TATCCAACCG CGATTTGGAA ACGCAAACGC 
650
AATTAGTGAT CATGATGACT GGTCGCAGTA CTTGTCACAA AACATGCCTA 
700
CAAGCTTTTC AGATTACGGA TCTCCTTATG GACCATACCT CACTCAATCA 
750
AAGGTGAATA CAGAAGTGCA ATGTGAGATG TTTCAACACC AAATGTCATT 
800
GCCACCATTG CGAGTAGAAA ACTCGCAGGC TCAAACCAGC GATTTCTCCA 
850
AGAGACTACA TCAAAACAGT GGTCAAAGTG GGTTCGACGA CTTTACTTTC 
900
GCTGCAAGTA ACTCCAACCA ATTCTACAAC AGCAACGTTG ATGATCATTT 
950
GATACACATT GGAAATCTTG ACGAGCAGAG TTATATAGAA GAACAAGAAT 
1000
TGATTTTGCC AAGTTTCCAG AGTAATGATC AAGATCTTGA ACTTTATGGC 
1050
GGATCTCGGA CCAATACAAT AGACAACATA GAGATCGACG ATTTTTTCTC 
1100
GTTTGAGAAC CAAGCACAAG ACAACGACAA CTCAAACGTA ACCCCAAACT 
1150
CGGCAGGATT CGAAATGATT GGAGAAGAGA TTATAGTAAA CCATAAAATG 
1200
CTCATTAGTA CACGGCAGAC TACGGAGATT TTATACTATC AAGTGGTACC 
1250
GTCGCAGATA TTGAAAATTC ACATAAATCC GGTTCATGGA AATGAAGAGA 
1300
GAACAATGTT AATGGAAGAA GACAGTGATG ATTCTTGGTT CCAGAAGGCT 
1350
GAAAATGTTG CGAAGATGAA ACTGAAACAG ATTAGTTTAG TTGCAAAACG 
1400
TTATTACAAA TGTCTTACTA TTATTTTCTG A
1450

>AT5G17260.1 longest ORF length:476
MAPVSLPPGF RFHPTDEELI TYYLKRKING QEIELEIIPE VDLYKCEPWD 
50
LPGKSLIPSK DQEWFFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW 
100
RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDESECEP SAFGMQDAYA 
150
LCRVFKKIVI EAKPRDQHQQ QHQPYVHTSS NISGSSSFDV CSDLEISSNT 
200
PYNTAAHIQP RFGNANAISD HDDWSQYLSQ NMPTSFSDYG SPYGPYLTQS 
250
KVNTEVQCEM FQHQMSLPPL RVENSQAQTS DFSKRLHQNS GQSGFDDFTF 
300
AASNSNQFYN SNVDDHLIHI GNLDEQSYIE EQELILPSFQ SNDQDLELYG 
350
GSRTNTIDNI EIDDFFSFEN QAQDNDNSNV TPNSAGFEMI GEEIIVNHKM 
400
LISTRQTTEI LYYQVVPSQI LKIHINPVHG NEERTMLMEE DSDDSWFQKA 
450
ENVAKMKLKQ ISLVAKRYYK CLTIIF
500