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| Locus | Common name | Short description |
| AT5G17430 | BBM | BABY BOOM, Integrase-type DNA-binding superfamily protein (.1) |
>AT5G17430.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaAI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BstAPI, BstEII, BstNI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, HaeII, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SspI, StyI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 621 |
| AccI | GT|[AC][TG]AC | 1151, 1356 |
| AccII(FnuDII) | CG|CG | 632 |
| AciI | C|CGC | 90, 129, 310, 631, 783 |
| AclI | AA|CGTT | 1225, 1728 |
| AflIII | A|CPuPyGT | 1688 |
| AluI | AG|CT | 196, 291, 763, 976, 1204, 1298, 1451, 1679 |
| ApaLI | G|TGCAC | 476 |
| ApoI | Pu|AATTPy | 300, 501, 1075 |
| AvaI | C|PyCGPuG | 227, 1138, 1146 |
| AvaII | G|G[AT]CC | 285 |
| BanII | GPuGCPy|C | 1143, 1721 |
| BclI | T|GATCA | 45, 1443 |
| BfaI | C|TAG | 398, 510, 765, 978, 1368 |
| BlpI | GC|TNAGC | 1607 |
| BsaBI | GATNN|NNATC | 50 |
| BsaHI | GPu|CGPyC | 621 |
| BsaJI | C|CNNGG | 306, 633 |
| BsaWI | [AT]|CCGG[AT] | 1197, 1656 |
| BsiEI | CGPuPy|CG | 309 |
| BsiHKAI | G[AT]GC[AT]|C | 476 |
| BsiWI | C|GTACG | 61 |
| BslI | CCNNNNN|NNGG | 232, 1016 |
| BsoBI | C|PyCGPuG | 227, 1138, 1146 |
| Bsp1286I | G[GAT]GC[CAT]|C | 476, 1143, 1721 |
| BspDI | AT|CGAT | 930 |
| BspHI | T|CATGA | 42 |
| BsrFI | Pu|CCGGPy | 997 |
| BsrI | ACTGGN| | 17 |
| BssKI | |CCNGG | 1641 |
| BssSI | C|TCGTG | 920 |
| BstBI | TT|CGAA | 1668 |
| BstF5I | GGATGNN| | 67 |
| BstUI | CG|CG | 632 |
| BtgI | C|CPuPyGG | 633 |
| BtsI | GCAGTGNN| | 1095 |
| Cac8I | GCN|NGC | 253, 975 |
| Cfr10I | [AG]|CCGG[TC] | 997 |
| ClaI | AT|CGAT | 930 |
| DdeI | C|TNAG | 426, 1048, 1567, 1606, 1750 |
| DpnI | GA-CH3|TC | 44, 122, 982, 1442, 1550 |
| DpnII | |GATC | 44, 122, 982, 1442, 1550 |
| EaeI | Py|GGCCPu | 128, 309 |
| EagI | C|GGCCG | 309 |
| EcoRI | G|AATTC | 501 |
| Fnu4HI | GC|NGC | 129, 310, 391, 762, 783, 1044, 1065, 1307, 1563 |
| FspI | TGC|GCA | 896 |
| HaeIII | GG|CC | 127, 308, 401, 704 |
| HhaI | GCG|C | 895, 1089 |
| HinP1I | G|CGC | 895, 1089 |
| HincII | GTPy|PuAC | 70 |
| HindIII | A|AGCTT | 197, 292 |
| HinfI | G|ANTC | 72, 144, 710, 991, 1148, 1424, 1467, 1516, 1628 |
| HpaII | C|CGG | 105, 996, 1196, 1640, 1655 |
| Hpy188I | TCN|GA | 138, 985, 1078, 1230, 1461 |
| HpyCH4III | ACN|GT | 58, 115, 342, 379, 472, 1476 |
| HpyCH4IV | A|CGT | 620, 1174, 1185, 1224, 1326, 1727 |
| HpyCH4V | TG|CA | 250, 254, 475, 692, 925, 1063, 1237, 1305 |
| MboI | |GATC | 44, 122, 982, 1442, 1550 |
| MseI | T|TAA | 264, 1071, 1085, 1125, 1188, 1542 |
| MslI | CAPyNN|NNPuTG | 678, 962 |
| MspA1I | C[AC]G|C[GT]G | 633 |
| MspI | C|CGG | 105, 996, 1196, 1640, 1655 |
| MwoI | GCNNNNN|NNGC | 400, 712, 768, 1050, 1313, 1572, 1622 |
| N.BstNBI | GAGTCNNNN|N | 996, 1153, 1429 |
| NciI | CC|[CG]GG | 1641 |
| NlaIII | CATG| | 41, 252, 420, 865, 962, 1108, 1429, 1687 |
| NlaIV | GGN|NCC | 802, 1200, 1722 |
| NspI | PuCATG|Py | 253, 1688 |
| PaeR7I | C|TCGAG | 1138 |
| PciI | A|CATGT | 1688 |
| RsaI | GT|AC | 60, 112, 1324, 1365, 1690 |
| SacII | CCGC|GG | 633 |
| Sau3AI | |GATC | 44, 122, 982, 1442, 1550 |
| Sau96I | G|GNCC | 285 |
| ScaI | AGT|ACT | 1366 |
| ScrFI | CC|NGG | 1641 |
| SmlI | C|TPyPuAG | 295, 828, 1138, 1180, 1410 |
| SpeI | A|CTAGT | 511 |
| SphI | GCATG|C | 253 |
| StuI | AGG|CCT | 402 |
| Taqƒ¿I | T|CGA | 5, 192, 407, 929, 937, 1104, 1137, 1454, 1667 |
| TfiI | G|A[AT]TC | 144, 1467, 1516, 1628 |
| TliI | C|TCGAG | 1138 |
| TseI | G|C[AT]GC | 762, 1044, 1065, 1307, 1563 |
| Tsp45I | |GT[CG]AC | 186, 220, 1095, 1426 |
| Tsp509I | |AATT | 299, 500, 1074, 1544 |
| TspRI | NNCA[CG]TGNN| | 1095, 1267 |
| XhoI | C|TCGAG | 1138 |
Click here to view TAIR data
>AT5G17430.1 length:1755
ATGAACTCGA TGAATAACTG GTTAGGCTTC TCTCTCTCTC CTCATGATCA | 50 |
AAATCATCAC CGTACGGATG TTGACTCCTC CACCACCAGA ACCGCCGTAG | 100 |
ATGTTGCCGG AGGGTACTGT TTTGATCTGG CCGCTCCCTC CGATGAATCT | 150 |
TCTGCCGTTC AAACATCTTT TCTTTCTCCT TTCGGTGTCA CCCTCGAAGC | 200 |
TTTCACCAGA GACAATAATA GTCACTCCCG AGATTGGGAC ATCAATGGTG | 250 |
GTGCATGCAA TAACATTAAC AATAACGAAC AAAATGGACC AAAGCTTGAG | 300 |
AATTTCCTCG GCCGCACCAC CACGATTTAC AATACCAACG AGACCGTTGT | 350 |
AGATGGAAAT GGCGATTGTG GAGGAGGAGA CGGTGGTGGT GGCGGCTCAC | 400 |
TAGGCCTTTC GATGATAAAA ACATGGCTGA GTAATCATTC GGTTGCTAAT | 450 |
GCTAATCATC AAGACAATGG TAACGGTGCA CGAGGCTTGT CCCTCTCTAT | 500 |
GAATTCATCT ACTAGTGATA GCAACAACTA CAACAACAAT GATGATGTCG | 550 |
TCCAAGAGAA GACTATTGTT GATGTCGTAG AAACTACACC GAAGAAAACT | 600 |
ATTGAGAGTT TTGGACAAAG GACGTCTATA TACCGCGGTG TTACAAGGCA | 650 |
TCGGTGGACA GGTAGATACG AGGCACATTT ATGGGACAAT AGTTGCAAAA | 700 |
GAGAAGGCCA GACTCGCAAA GGAAGACAAG TTTATCTGGG AGGTTATGAC | 750 |
AAAGAAGAAA AAGCAGCTAG GGCTTACGAT TTAGCCGCAC TAAAGTATTG | 800 |
GGGAACCACC ACTACTACTA ACTTCCCCTT GAGTGAATAT GAGAAAGAGG | 850 |
TAGAAGAGAT GAAGCACATG ACGAGGCAAG AGTATGTTGC CTCTCTGCGC | 900 |
AGGAAAAGTA GTGGTTTCTC TCGTGGTGCA TCGATTTATC GAGGAGTAAC | 950 |
AAGGCATCAC CAACATGGAA GGTGGCAAGC TAGGATCGGA AGAGTCGCCG | 1000 |
GTAACAAAGA CCTCTACTTG GGAACTTTCG GCACACAGGA AGAGGCTGCT | 1050 |
GAGGCTTATG ACATTGCAGC CATTAAATTC AGAGGATTAA GCGCAGTGAC | 1100 |
TAACTTCGAC ATGAACAGAT ACAATGTTAA AGCAATCCTC GAGAGCCCGA | 1150 |
GTCTACCTAT TGGTAGTTCT GCGAAACGTC TCAAGGACGT TAATAATCCG | 1200 |
GTTCCAGCTA TGATGATTAG TAATAACGTT TCAGAGAGTG CAAATAATGT | 1250 |
TAGCGGTTGG CAAAACACTG CGTTTCAGCA TCATCAGGGA ATGGATTTGA | 1300 |
GCTTATTGCA GCAACAGCAG GAGAGGTACG TTGGTTATTA CAATGGAGGA | 1350 |
AACTTGTCTA CCGAGAGTAC TAGGGTTTGT TTCAAACAAG AGGAGGAACA | 1400 |
ACAACACTTC TTGAGAAACT CGCCGAGTCA CATGACTAAT GTTGATCATC | 1450 |
ATAGCTCGAC CTCTGATGAT TCTGTTACCG TTTGTGGAAA TGTTGTTAGT | 1500 |
TATGGTGGTT ATCAAGGATT CGCAATCCCT GTTGGAACAT CGGTTAATTA | 1550 |
CGATCCCTTT ACTGCTGCTG AGATTGCTTA CAACGCAAGA AATCATTATT | 1600 |
ACTATGCTCA GCATCAGCAA CAACAGCAGA TTCAGCAGTC GCCGGGAGGA | 1650 |
GATTTTCCGG TGGCGATTTC GAATAACCAT AGCTCTAACA TGTACTTTCA | 1700 |
CGGGGAAGGT GGTGGAGAAG GGGCTCCAAC GTTTTCAGTT TGGAACGACA | 1750 |
CTTAG | 1800 |
>AT5G17430.1 longest ORF length:584
MNSMNNWLGF SLSPHDQNHH RTDVDSSTTR TAVDVAGGYC FDLAAPSDES | 50 |
SAVQTSFLSP FGVTLEAFTR DNNSHSRDWD INGGACNNIN NNEQNGPKLE | 100 |
NFLGRTTTIY NTNETVVDGN GDCGGGDGGG GGSLGLSMIK TWLSNHSVAN | 150 |
ANHQDNGNGA RGLSLSMNSS TSDSNNYNNN DDVVQEKTIV DVVETTPKKT | 200 |
IESFGQRTSI YRGVTRHRWT GRYEAHLWDN SCKREGQTRK GRQVYLGGYD | 250 |
KEEKAARAYD LAALKYWGTT TTTNFPLSEY EKEVEEMKHM TRQEYVASLR | 300 |
RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL GTFGTQEEAA | 350 |
EAYDIAAIKF RGLSAVTNFD MNRYNVKAIL ESPSLPIGSS AKRLKDVNNP | 400 |
VPAMMISNNV SESANNVSGW QNTAFQHHQG MDLSLLQQQQ ERYVGYYNGG | 450 |
NLSTESTRVC FKQEEEQQHF LRNSPSHMTN VDHHSSTSDD SVTVCGNVVS | 500 |
YGGYQGFAIP VGTSVNYDPF TAAEIAYNAR NHYYYAQHQQ QQQIQQSPGG | 550 |
DFPVAISNNH SSNMYFHGEG GGEGAPTFSV WNDT | 600 |