Locus |
Common name |
Short description |
AT5G17810 |
WOX12 |
WUSCHEL related homeobox 12 (.1.2) |
>AT5G17810.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BfaI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DdeI, DraIII, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
Acc65I
| G|GTACC |
789 |
AciI
| C|CGC |
264, 270 |
AluI
| AG|CT |
246, 286, 385, 545 |
ApoI
| Pu|AATTPy |
169 |
BalI
| TGG|CCA |
507 |
BanI
| G|GPyPuCC |
789 |
BclI
| T|GATCA |
519, 579 |
BglII
| A|GATCT |
226 |
BsaBI
| GATNN|NNATC |
524 |
BsaJI
| C|CNNGG |
438 |
BsaWI
| [AT]|CCGG[AT] |
75 |
Bsp1286I
| G[GAT]GC[CAT]|C |
56 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
789 |
BsrFI
| Pu|CCGGPy |
242 |
BsrI
| ACTGGN| |
203 |
BssKI
| |CCNGG |
53, 785 |
BstEII
| G|GTNACC |
66 |
BstNI
| CC|[AT]GG |
785 |
BstYI
| Pu|GATCPy |
226 |
Cac8I
| GCN|NGC |
320 |
Cfr10I
| [AG]|CCGG[TC] |
242 |
DpnI
| GA-CH3|TC |
225, 405, 518, 578 |
DpnII
| |GATC |
225, 405, 518, 578 |
DraI
| TTT|AAA |
567 |
DrdI
| GACNNNN|NNGTC |
193 |
EaeI
| Py|GGCCPu |
311, 507 |
Fnu4HI
| GC|NGC |
245, 255, 267, 337, 533, 555 |
HaeIII
| GG|CC |
310, 440, 506 |
HincII
| GTPy|PuAC |
121 |
HinfI
| G|ANTC |
2, 96, 488, 513, 693 |
HpaI
| GTT|AAC |
121 |
HpaII
| C|CGG |
52, 74, 232, 241 |
Hpy188I
| TCN|GA |
516, 576 |
Hpy99I
| CG[AT]CG| |
216, 409 |
HpyCH4III
| ACN|GT |
109, 117, 141, 218, 621 |
HpyCH4IV
| A|CGT |
58, 192 |
HpyCH4V
| TG|CA |
321, 335, 556, 753 |
KpnI
| GGTAC|C |
789 |
MboI
| |GATC |
225, 405, 518, 578 |
MscI
| TGG|CCA |
507 |
MseI
| T|TAA |
120, 399, 566 |
MslI
| CAPyNN|NNPuTG |
319 |
MspI
| C|CGG |
52, 74, 232, 241 |
MwoI
| GCNNNNN|NNGC |
264 |
NciI
| CC|[CG]GG |
53 |
NlaIII
| CATG| |
304, 313, 319, 509, 670, 767, 801 |
NlaIV
| GGN|NCC |
789 |
NsiI
| ATGCA|T |
322, 754 |
NspI
| PuCATG|Py |
320 |
PsiI
| TTA|TAA |
629 |
PspGI
| |CC[AT]GG |
785 |
RsaI
| GT|AC |
114, 788 |
Sau3AI
| |GATC |
225, 405, 518, 578 |
ScrFI
| CC|NGG |
53, 785 |
SmlI
| C|TPyPuAG |
163 |
SphI
| GCATG|C |
320 |
Taqƒ¿I
| T|CGA |
93 |
TfiI
| G|A[AT]TC |
2, 96, 488, 513, 693 |
TseI
| G|C[AT]GC |
245, 255, 267, 337, 533, 555 |
Tsp45I
| |GT[CG]AC |
65 |
Tsp509I
| |AATT |
168, 389 |
TspRI
| NNCA[CG]TGNN| |
112, 733 |
XmnI
| GAANN|NNTTC |
493 |
Click here to view TAIR data
>AT5G17810.1 length:807
ATGAATCAAG AAGGTGCTTC ACATAGCCCA TCCTCCACTT CCACCGAACC | 50 |
AGTCCGGGCA CGTTGGTCAC CTAAACCGGA GCAAATCTTG ATACTCGAAT | 100 |
CCATCTTCAA CAGTGGTACT GTTAACCCAC CAAAAGATGA AACGGTGAGG | 150 |
ATAAGAAAGA TGCTTGAGAA ATTCGGTGCT GTGGGAGACG CAAACGTCTT | 200 |
CTACTGGTTT CAAAACCGAC GGTCAAGATC TCGCCGGAGA CACCGGCAGC | 250 |
TTTTAGCAGC CACCACCGCA GCCGCCACCT CCATAGGAGC TGAAGACCAC | 300 |
CAGCACATGA CGGCCATGAG CATGCATCAA TATCCTTGCA GCAACAACGA | 350 |
GATTGATTTG GGGTTTGGAA GTTGTAGCAA CTTATCAGCT AATTACTTCC | 400 |
TTAATGGATC GTCGTCATCT CAAATCCCTT CCTTTTTCCT CGGCCTCTCT | 450 |
TCTTCAAGTG GTGGGTGTGA GAACAACAAT GGTATGGAGA ATCTCTTCAA | 500 |
AATGTATGGC CATGAATCTG ATCATAATCA TCAGCAGCAG CATCATAGCT | 550 |
CAAATGCTGC ATCAGTTTTA AACCCATCTG ATCAAAACTC CAACTCCCAA | 600 |
TACGAACAAG AAGGGTTTAT GACGGTGTTT ATAAACGGAG TTCCTATGGA | 650 |
AGTAACAAAA GGAGCAATAG ACATGAAAAC AATGTTCGGT GATGATTCGG | 700 |
TGTTACTTCA TTCCTCTGGT CTTCCTCTTC CCACTGATGA GTTTGGTTTC | 750 |
TTGATGCATT CTTTACAACA TGGACAAACT TATTTCCTGG TACCGAGACA | 800 |
GACATGA | 850 |
>AT5G17810.1 longest ORF length:268
MNQEGASHSP SSTSTEPVRA RWSPKPEQIL ILESIFNSGT VNPPKDETVR | 50 |
IRKMLEKFGA VGDANVFYWF QNRRSRSRRR HRQLLAATTA AATSIGAEDH | 100 |
QHMTAMSMHQ YPCSNNEIDL GFGSCSNLSA NYFLNGSSSS QIPSFFLGLS | 150 |
SSSGGCENNN GMENLFKMYG HESDHNHQQQ HHSSNAASVL NPSDQNSNSQ | 200 |
YEQEGFMTVF INGVPMEVTK GAIDMKTMFG DDSVLLHSSG LPLPTDEFGF | 250 |
LMHSLQHGQT YFLVPRQT | 300 |
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