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| Locus | Common name | Short description |
| AT5G18000 | VDD | VERDANDI (.1) |
>AT5G18000.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MslI, MwoI, NaeI, , NarI, NciI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AflII | C|TTAAG | 165 |
| AluI | AG|CT | 13, 490, 528, 651, 876 |
| ApoI | Pu|AATTPy | 216, 646, 700 |
| BalI | TGG|CCA | 833 |
| BamHI | G|GATCC | 689 |
| BfaI | C|TAG | 381 |
| BsaJI | C|CNNGG | 175, 836 |
| BsaWI | [AT]|CCGG[AT] | 388 |
| BsiEI | CGPuPy|CG | 390 |
| BspHI | T|CATGA | 300 |
| BsrFI | Pu|CCGGPy | 622 |
| BsrGI | T|GTACA | 798 |
| BsrI | ACTGGN| | 852 |
| BstBI | TT|CGAA | 71 |
| BstF5I | GGATGNN| | 242, 775, 821 |
| BstYI | Pu|GATCPy | 689 |
| BtgI | C|CPuPyGG | 175 |
| Cfr10I | [AG]|CCGG[TC] | 622 |
| DdeI | C|TNAG | 357, 724 |
| DpnI | GA-CH3|TC | 80, 233, 688 |
| DpnII | |GATC | 80, 233, 688 |
| EaeI | Py|GGCCPu | 833 |
| EcoRI | G|AATTC | 646 |
| HaeIII | GG|CC | 832 |
| HindIII | A|AGCTT | 14 |
| HinfI | G|ANTC | 65, 107, 453, 465, 495, 612, 743, 808, 824 |
| HpaII | C|CGG | 387, 621 |
| Hpy188I | TCN|GA | 26, 135, 392, 462, 615, 752, 856 |
| HpyCH4III | ACN|GT | 265, 600 |
| HpyCH4IV | A|CGT | 869 |
| HpyCH4V | TG|CA | 711 |
| MboI | |GATC | 80, 233, 688 |
| MscI | TGG|CCA | 833 |
| MseI | T|TAA | 153, 164, 195, 318, 531 |
| MspA1I | C[AC]G|C[GT]G | 491 |
| MspI | C|CGG | 387, 621 |
| N.BstNBI | GAGTCNNNN|N | 458, 829 |
| NcoI | C|CATGG | 175 |
| NdeI | CA|TATG | 715, 782 |
| NlaIII | CATG| | 174, 186, 226, 299, 768 |
| NlaIV | GGN|NCC | 245, 689 |
| NsiI | ATGCA|T | 712 |
| PvuII | CAG|CTG | 491 |
| RsaI | GT|AC | 170, 345, 624, 797, 867 |
| Sau3AI | |GATC | 80, 233, 688 |
| SmlI | C|TPyPuAG | 165, 537 |
| StyI | C|C[AT][AT]GG | 175, 836 |
| Taqƒ¿I | T|CGA | 70, 86, 333, 467 |
| TfiI | G|A[AT]TC | 65, 107, 465, 495, 743, 808 |
| Tsp45I | |GT[CG]AC | 481, 789 |
| Tsp509I | |AATT | 215, 645, 699 |
| TspRI | NNCA[CG]TGNN| | 793 |
Click here to view TAIR data
>AT5G18000.1 length:924
ATGGTGAAAA ACAAAGCTTT TTTTGGTCAG ATTATGGAAG AAAGAGATAA | 50 |
TCCAGCATTC TTCAAGATTC TTCGAAGGGA AGATCATTCG ACTGAAATGA | 100 |
TGAGAATGAT TCCTCATCAC TTGATAAGAA GCATCTCCGA CAAGTCTTCA | 150 |
TCGTTTAAGA TGGTCTTAAG AGTACCATGG GGAAGGTCAT GGCAAGTTAA | 200 |
AATCTCCAAG AACCCAAATT TTCACTACAT GGAAGATCGT GGATGGAACC | 250 |
AGTTTGTGAA TGACAACGGT TTGGGTGAAA ACGAGTATCT TACTTTCACT | 300 |
CATGAGGCAA ATATGTGCTT TAATGTAACC ATATTCGAGG CAGATGGTAC | 350 |
GGAGATGCTT AGACCAAGAA AAACCATTAC TTCTAGTTCC GGTCGGAACA | 400 |
AGAGAGAAGA GAGGAAGAGC ATCTACAAAG ATGTGAAGAA GGAAGAAGAG | 450 |
ATAGAGTCTT GGTCTGAATC GAGCCATCCT TGTCACAAAA CAGCTGAATC | 500 |
TACAAGTGGG AGATTGACGC AGAAACAGGA GCTTAACTTG AGAAAGAAGG | 550 |
AAGCCGATAA AACCGAAAAA TCCAAGACGA GTAAGAAGAA GAAGGTGGAA | 600 |
ACTGTTAGTA ACGACTCTGA AGCCGGTACT TCATCTCTTA TTCCAGAATT | 650 |
CAAGCTCACC ATAAAGAAAT CACACCTTCT GTTCTTGGGG ATCCCAAAGA | 700 |
AATTTGTGGA TATGCATATG CCAACTGAGA CAACGATGTT CAAGATTCAT | 750 |
TATCCGAGAG GAAAGAAGTC ATGGGATGTT ACATATGTGG TCACTGATGT | 800 |
ACAATCAAGA TTCTCTGGTG GATGGAGTCG TTTGGCCAAG GAGTTAGGTT | 850 |
TACTGGTCGG AGATGTTTGT ACGTTCAAGC TCATCAAACC GACAGAGATG | 900 |
CGTGTGAAAG TCTCCAAAGA ATAG | 950 |
>AT5G18000.1 longest ORF length:307
MVKNKAFFGQ IMEERDNPAF FKILRREDHS TEMMRMIPHH LIRSISDKSS | 50 |
SFKMVLRVPW GRSWQVKISK NPNFHYMEDR GWNQFVNDNG LGENEYLTFT | 100 |
HEANMCFNVT IFEADGTEML RPRKTITSSS GRNKREERKS IYKDVKKEEE | 150 |
IESWSESSHP CHKTAESTSG RLTQKQELNL RKKEADKTEK SKTSKKKKVE | 200 |
TVSNDSEAGT SSLIPEFKLT IKKSHLLFLG IPKKFVDMHM PTETTMFKIH | 250 |
YPRGKKSWDV TYVVTDVQSR FSGGWSRLAK ELGLLVGDVC TFKLIKPTEM | 300 |
RVKVSKE | 350 |