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| Locus | Common name | Short description |
| AT5G18090 | AP2/B3-like transcriptional factor family protein (.1) |
>AT5G18090.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AccIII(BspMII) | T|CCGGA | 738 |
| AhdI | GACNNN|NNGTC | 453, 615 |
| AluI | AG|CT | 209, 345, 470, 490, 521, 693 |
| ApoI | Pu|AATTPy | 194, 631 |
| AvaI | C|PyCGPuG | 46 |
| BamHI | G|GATCC | 101 |
| BfaI | C|TAG | 381 |
| BglII | A|GATCT | 364 |
| BlpI | GC|TNAGC | 520 |
| BsaJI | C|CNNGG | 46, 297, 317, 542 |
| BsaWI | [AT]|CCGG[AT] | 388, 738 |
| BsiEI | CGPuPy|CG | 390 |
| BslI | CCNNNNN|NNGG | 737 |
| BsoBI | C|PyCGPuG | 46 |
| BspEI | T|CCGGA | 738 |
| BspHI | T|CATGA | 92 |
| BssKI | |CCNGG | 45, 477 |
| BstAPI | GCANNNN|NTGC | 375 |
| BstBI | TT|CGAA | 65 |
| BstF5I | GGATGNN| | 31, 236, 760 |
| BstNI | CC|[AT]GG | 477 |
| BstYI | Pu|GATCPy | 59, 101, 364, 728 |
| BtgI | C|CPuPyGG | 317 |
| DdeI | C|TNAG | 148, 519, 550 |
| DpnI | GA-CH3|TC | 58, 100, 239, 363, 727, 734, 838 |
| DpnII | |GATC | 58, 100, 239, 363, 727, 734, 838 |
| Fnu4HI | GC|NGC | 695 |
| HaeIII | GG|CC | 183 |
| HindIII | A|AGCTT | 210 |
| HinfI | G|ANTC | 41, 453, 465, 495, 597, 674, 793, 809, 892 |
| HpaII | C|CGG | 45, 387, 737 |
| Hpy188I | TCN|GA | 20, 84, 129, 392, 462, 841 |
| HpyCH4III | ACN|GT | 315, 337, 610 |
| HpyCH4V | TG|CA | 34, 70, 367, 696, 851 |
| MboI | |GATC | 58, 100, 239, 363, 727, 734, 838 |
| MseI | T|TAA | 158 |
| MspA1I | C[AC]G|C[GT]G | 491 |
| MspI | C|CGG | 45, 387, 737 |
| MwoI | GCNNNNN|NNGC | 375, 701 |
| N.BstNBI | GAGTCNNNN|N | 458, 897 |
| NciI | CC|[CG]GG | 45 |
| NdeI | CA|TATG | 700 |
| NlaIII | CATG| | 91, 168, 731, 753 |
| NlaIV | GGN|NCC | 101 |
| PspGI | |CC[AT]GG | 477 |
| PvuII | CAG|CTG | 491 |
| Sau3AI | |GATC | 58, 100, 239, 363, 727, 734, 838 |
| ScrFI | CC|NGG | 45, 477 |
| SfcI | C|TPuPyAG | 500 |
| SmaI | CCC|GGG | 46 |
| SmlI | C|TPyPuAG | 525, 602 |
| StyI | C|C[AT][AT]GG | 297, 542 |
| Taqƒ¿I | T|CGA | 64, 467 |
| TfiI | G|A[AT]TC | 41, 465, 495, 597, 674, 793, 809 |
| TseI | G|C[AT]GC | 695 |
| Tsp45I | |GT[CG]AC | 481 |
| Tsp509I | |AATT | 193, 630 |
| XmaI | C|CCGGG | 46 |
Click here to view TAIR data
>AT5G18090.1 length:906
ATGAAGAACA AAGCGTTTGG TCAGATTATG GATGATGCAG AGAATCCCGG | 50 |
GTTCTTCAAG ATCCTTCGAA GTGCAGATTT ATCGTCTGAA ATCATGAGAG | 100 |
GGATCCCTCT AAACTTCATC AAAAGCATCT CGGAAGAAGA GTTATCGGCT | 150 |
AAGATGTTGT TAAAAGTGTC ATGGGGAAGT TCTTGGCCTA TCAAAATTTG | 200 |
TAGAAACCCA AGCTTCTACT TTATGGAGAA AAAGGGATGG GATCAGTTTT | 250 |
TGAGCGACAA TGGATTAGGT AATGATGAGT TTCTTACCTT CACACACCAA | 300 |
GGAAATATGT GCTTTACCGT GGACATCTAC CAAATAGACG GTAAAGAGCT | 350 |
ACTTACACCA CGCAGATCTG CAACCATTGC TTCTAGTTCC GGTCGGAACA | 400 |
AGAGAGAACA AAGGAATAAC ATCTACAAAG ATGTGAAGGA GGAAGAAGAC | 450 |
ATAGAGTCTT GGTCTGAATC GAGCTATCCT GGTCACAAAA CAGCTGAATC | 500 |
TACAGGAAGA AGACAAAGGC TTAGCTTGAG TAATAAGAAA GCCAAGGAAA | 550 |
CTGAGAAATC AAAGAAGAAG AAGATGAAGG TGGAAAGTAT TAGTTACGAT | 600 |
TCTCAAGATG ACAGTTTGTC TCTTGTTCCA GAATTTACCC TCACCATAAA | 650 |
GAAATCATAC CTCATTTTCT TGGGGATTCC AAAGATGTTT GAGGAGCTGC | 700 |
ATATGCCAAC GGAGGCAACT ATGTTCAAGA TCCATGATCC GGAAGGGAAA | 750 |
AGGTCATGGG ATGTTATGTA TAAGTTCAGT AATAACCAGA CAAGATTCTG | 800 |
TGCTGGTTGG ATTCGTTTGG CTAAAGAACT TGGTTTGGAG ATCGGAGATG | 850 |
TTTGCACTTT CACGCTCATC AAACCTACCG AGATGCTTGT TAGAGTCTCT | 900 |
AAATAA | 950 |
>AT5G18090.1 longest ORF length:301
MKNKAFGQIM DDAENPGFFK ILRSADLSSE IMRGIPLNFI KSISEEELSA | 50 |
KMLLKVSWGS SWPIKICRNP SFYFMEKKGW DQFLSDNGLG NDEFLTFTHQ | 100 |
GNMCFTVDIY QIDGKELLTP RRSATIASSS GRNKREQRNN IYKDVKEEED | 150 |
IESWSESSYP GHKTAESTGR RQRLSLSNKK AKETEKSKKK KMKVESISYD | 200 |
SQDDSLSLVP EFTLTIKKSY LIFLGIPKMF EELHMPTEAT MFKIHDPEGK | 250 |
RSWDVMYKFS NNQTRFCAGW IRLAKELGLE IGDVCTFTLI KPTEMLVRVS | 300 |
K | 350 |