fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G18090 AP2/B3-like transcriptional factor family protein (.1)

>AT5G18090.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 101
BglII A|GATCT 364
HindIII A|AGCTT 210
NdeI CA|TATG 700
PvuII CAG|CTG 491
SmaI CCC|GGG 46
StyI C|C[AT][AT]GG 297, 542


Click here to view TAIR data

>AT5G18090.1 length:906
ATGAAGAACA AAGCGTTTGG TCAGATTATG GATGATGCAG AGAATCCCGG 
50
GTTCTTCAAG ATCCTTCGAA GTGCAGATTT ATCGTCTGAA ATCATGAGAG 
100
GGATCCCTCT AAACTTCATC AAAAGCATCT CGGAAGAAGA GTTATCGGCT 
150
AAGATGTTGT TAAAAGTGTC ATGGGGAAGT TCTTGGCCTA TCAAAATTTG 
200
TAGAAACCCA AGCTTCTACT TTATGGAGAA AAAGGGATGG GATCAGTTTT 
250
TGAGCGACAA TGGATTAGGT AATGATGAGT TTCTTACCTT CACACACCAA 
300
GGAAATATGT GCTTTACCGT GGACATCTAC CAAATAGACG GTAAAGAGCT 
350
ACTTACACCA CGCAGATCTG CAACCATTGC TTCTAGTTCC GGTCGGAACA 
400
AGAGAGAACA AAGGAATAAC ATCTACAAAG ATGTGAAGGA GGAAGAAGAC 
450
ATAGAGTCTT GGTCTGAATC GAGCTATCCT GGTCACAAAA CAGCTGAATC 
500
TACAGGAAGA AGACAAAGGC TTAGCTTGAG TAATAAGAAA GCCAAGGAAA 
550
CTGAGAAATC AAAGAAGAAG AAGATGAAGG TGGAAAGTAT TAGTTACGAT 
600
TCTCAAGATG ACAGTTTGTC TCTTGTTCCA GAATTTACCC TCACCATAAA 
650
GAAATCATAC CTCATTTTCT TGGGGATTCC AAAGATGTTT GAGGAGCTGC 
700
ATATGCCAAC GGAGGCAACT ATGTTCAAGA TCCATGATCC GGAAGGGAAA 
750
AGGTCATGGG ATGTTATGTA TAAGTTCAGT AATAACCAGA CAAGATTCTG 
800
TGCTGGTTGG ATTCGTTTGG CTAAAGAACT TGGTTTGGAG ATCGGAGATG 
850
TTTGCACTTT CACGCTCATC AAACCTACCG AGATGCTTGT TAGAGTCTCT 
900
AAATAA
950

>AT5G18090.1 longest ORF length:301
MKNKAFGQIM DDAENPGFFK ILRSADLSSE IMRGIPLNFI KSISEEELSA 
50
KMLLKVSWGS SWPIKICRNP SFYFMEKKGW DQFLSDNGLG NDEFLTFTHQ 
100
GNMCFTVDIY QIDGKELLTP RRSATIASSS GRNKREQRNN IYKDVKEEED 
150
IESWSESSYP GHKTAESTGR RQRLSLSNKK AKETEKSKKK KMKVESISYD 
200
SQDDSLSLVP EFTLTIKKSY LIFLGIPKMF EELHMPTEAT MFKIHDPEGK 
250
RSWDVMYKFS NNQTRFCAGW IRLAKELGLE IGDVCTFTLI KPTEMLVRVS 
300
K
350