fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G18240 MYR1, ATMYR1 ARABIDOPSIS MYB-RELATED PROTEIN 1, myb-related protein 1 (.1.2.3.4.5)

>AT5G18240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 156, 1131
HindIII A|AGCTT 1102
HpaI GTT|AAC 955
NcoI C|CATGG 353
PstI CTGCA|G 694
PvuII CAG|CTG 599, 1197
SacI GAGCT|C 889
StyI C|C[AT][AT]GG 21, 353, 591
XbaI T|CTAGA 1128


Click here to view TAIR data

>AT5G18240.1 length:1209
ATGTATTACC ACAACCAGCA CCAAGGAAAG AGCATCCTCT CTTCATCGAG 
50
AATGCCCATT TCTTCTGAAA GGCATCCGTT CCTCAGAGGA AATGGCACAG 
100
GAGATTCTGG ACTCATTCTC TCCACTGATG CAAAGCCACG ACTAAAATGG 
150
ACTCCAGATC TTCACGAGAG ATTTGTTGAA GCGGTCAACC AGCTTGGAGG 
200
AGGAGATAAG GCTACTCCTA AGACAATCAT GAAAGTCATG GGCATTCCAG 
250
GCCTTACCTT ATACCATCTC AAGAGTCATC TTCAGAAATA TAGGCTAAGC 
300
AAGAATCTTA ATGGACAAGC TAACAGCAGT TTAAACAAGA CAAGTGTGAT 
350
GACCATGGTA GAAGAAAACC CCCCTGAAGT AGACGAAAGT CACAGTGAGA 
400
GTTTAAGCAT TGGACCACAG CCGAGCATGA ACTTACCCAT AAGTGATGCC 
450
CTTCAAATGC AAATAGAGGT CCAGAGACGG CTACACGAGC AACTTGAGGT 
500
ACAGCGACAT TTGCAGCTCA GGATAGAGGC TCAAGGAAAG TACCTGCAAT 
550
CGATTCTGGA GAAAGCACAA GAGACTCTTG GAAGACAGAA CCTAGGTGCA 
600
GCTGGGATTG AAGCAACAAA AGCTCAACTC TCAGAATTAG TATCTAAAGT 
650
ATCAGCAGAC TATCCAGACT CTAGTTTCCT CGAACCGAAA GAACTGCAGA 
700
ATCTACACCA TCAACAGATG CAAAAAACGT ATCCACCTAA CTCCTCCCTG 
750
GACAGTTGCC TAACCTCAAG TGAAGGAACT CAGAAAGCCC CAAAGATGCT 
800
TGACAACAGA CTGGGATTAA GAACATATAT TGGAGATTCA ACTTCAGAGC 
850
AGAAAGAGAT AATGGAAGAG CCATTCTTCC ATAGAATGGA GCTCACATGG 
900
GCAGAAGAAG AAAGCCTCAG AGAGAATCAC AACAGGCCAT ATCTTTCAAC 
950
AATGGTTAAC AACGCAGAAC CGAGAATCTC GTCTTCAAGA AGAAGTCCTG 
1000
GAAGATTGTC AATAGGAGTG GGATTACATG AACACAGAGG AAGGAGTAGC 
1050
AACAACAGTG AGTATACAGA AGAAAGATTC AACGAGAATA ATGAAGATTG 
1100
CAAGCTTGAA ACACACACAA GAACAGCTCT AGATCTTAAC ACACACGACG 
1150
AAAACTATGG CACAACGCGT CCTAAACAGT TTGATTTAAA TGGTTTCAGC 
1200
TGGAATTGA
1250

>AT5G18240.1 longest ORF length:402
MYYHNQHQGK SILSSSRMPI SSERHPFLRG NGTGDSGLIL STDAKPRLKW 
50
TPDLHERFVE AVNQLGGGDK ATPKTIMKVM GIPGLTLYHL KSHLQKYRLS 
100
KNLNGQANSS LNKTSVMTMV EENPPEVDES HSESLSIGPQ PSMNLPISDA 
150
LQMQIEVQRR LHEQLEVQRH LQLRIEAQGK YLQSILEKAQ ETLGRQNLGA 
200
AGIEATKAQL SELVSKVSAD YPDSSFLEPK ELQNLHHQQM QKTYPPNSSL 
250
DSCLTSSEGT QKAPKMLDNR LGLRTYIGDS TSEQKEIMEE PFFHRMELTW 
300
AEEESLRENH NRPYLSTMVN NAEPRISSSR RSPGRLSIGV GLHEHRGRSS 
350
NNSEYTEERF NENNEDCKLE THTRTALDLN THDENYGTTR PKQFDLNGFS 
400
WN
450