fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G18300 ANAC088 NAC domain containing protein 88 (.1)

>AT5G18300.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 199
HindIII A|AGCTT 103


Click here to view TAIR data

>AT5G18300.1 length:444
ATGATGCCGA TGACTGAAGA ATTTTACGAT GAAGAGGAAG AGCTTGGTTG 
50
CTTTAGATTT AATCCTTCAG AAGAAGAACT CATACTCGAT TATCTTCTAC 
100
CAAAGCTTGG CTTCCACCAA CCAAACACGA TATATTTGTT AGAAGACAGG 
150
GACAACATCT ACGCCAAAGA GCCGTGGCGG CTTAATCACA CAGAGAATGA 
200
TATCTTTGAA CCTAACGAGT GGTTTTATTT CGTGAAAAGG ACAAATCGCA 
250
AAGTTAAAGG TTGGAAAGCC ACTGGAGAGT TAAAAGATGT CGTGTCGAAG 
300
AAAACCGGTG AAGTGATCGG GAAGAAGAGG AATCTCAGGT TCTACGTTGA 
350
AGGTGATGAG AGCAAAACGA GTGGTTGGAC CATGAGGGAG TATTCTTCCA 
400
TTGGCAATCA AAACCAACGT CTCTGCCACC TTAAAGGACC ATGA
450

>AT5G18300.1 longest ORF length:147
MMPMTEEFYD EEEELGCFRF NPSEEELILD YLLPKLGFHQ PNTIYLLEDR 
50
DNIYAKEPWR LNHTENDIFE PNEWFYFVKR TNRKVKGWKA TGELKDVVSK 
100
KTGEVIGKKR NLRFYVEGDE SKTSGWTMRE YSSIGNQNQR LCHLKGP
150