fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G18450 DREB2G Integrase-type DNA-binding superfamily protein (.1)

>AT5G18450.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 43
HpaI GTT|AAC 591
NcoI C|CATGG 209, 907
SpeI A|CTAGT 556
StyI C|C[AT][AT]GG 209, 381, 907
XbaI T|CTAGA 46


Click here to view TAIR data

>AT5G18450.1 length:924
ATGGAAGAAG AGCAACCTCC GGCCAAGAAA CGAAACATGG GGAGATCTAG 
50
AAAAGGTTGC ATGAAAGGTA AAGGCGGTCC AGAGAACGCC ACGTGTACTT 
100
TCCGTGGAGT TAGGCAACGG ACTTGGGGTA AATGGGTGGC TGAGATCCGT 
150
GAGCCTAACC GTGGGACTCG TCTCTGGCTC GGCACGTTTA ATACCTCGGT 
200
CGAGGCCGCC ATGGCTTACG ATGAAGCCGC TAAGAAACTC TATGGACACG 
250
AGGCTAAACT CAACTTGGTG CACCCACAAC AACAACAACA AGTAGTAGTG 
300
AACAGAAACT TGTCTTTTTC TGGCCACGGG TCGGGTTCTT GGGCTTATAA 
350
TAAGAAGCTC GATATGGTTC ATGGGTTGGA CCTTGGTCTC GGCCAGGCAA 
400
GTTGTTCACG AGGTTCTTGC TCAGAGAGAT CGAGTTTTCT ACAAGAAGAT 
450
GATGATCATA GTCATAATCG ATGTTCGTCT TCAAGTGGTT CGAATCTTTG 
500
TTGGTTATTA CCTAAACAAA GTGATTCACA AGATCAAGAG ACCGTTAATG 
550
CTACGACTAG TTATGGCGGT GAAGGCGGTG GTGGCTCTAC GTTAACGTTT 
600
TCGACCAATT TGAAACCAAA GAATTTGATG AGTCAGAATT ATGGATTATA 
650
CAATGGAGCT TGGTCTAGGT TTCTTGTGGG GCAAGAAAAG AAGACGGAAC 
700
ATGACGTGTC ATCGTCGTGT GGATCGTCGG ACAACAAGGA GAGTATGTTG 
750
GTTCCTAGTT GCGGCGGAGA GAGGATGCAT AGGCCGGAGT TGGAAGAGCG 
800
AACAGGATAT TTGGAAATGG ATGATCTTTT GGAGATTGAT GATTTAGGTT 
850
TGTTGATTGG CAAAAATGGA GATTTCAAGA ATTGGTGTTG TGAAGAGTTT 
900
CAACATCCAT GGAATTGGTT CTGA
950

>AT5G18450.1 longest ORF length:307
MEEEQPPAKK RNMGRSRKGC MKGKGGPENA TCTFRGVRQR TWGKWVAEIR 
50
EPNRGTRLWL GTFNTSVEAA MAYDEAAKKL YGHEAKLNLV HPQQQQQVVV 
100
NRNLSFSGHG SGSWAYNKKL DMVHGLDLGL GQASCSRGSC SERSSFLQED 
150
DDHSHNRCSS SSGSNLCWLL PKQSDSQDQE TVNATTSYGG EGGGGSTLTF 
200
STNLKPKNLM SQNYGLYNGA WSRFLVGQEK KTEHDVSSSC GSSDNKESML 
250
VPSCGGERMH RPELEERTGY LEMDDLLEID DLGLLIGKNG DFKNWCCEEF 
300
QHPWNWF
350