Locus |
Common name |
Short description |
AT5G19650 |
ATOFP8, OFP8 |
ovate family protein 8 (.1) |
>AT5G19650.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
489 |
BglII
| A|GATCT |
69 |
HindIII
| A|AGCTT |
432 |
NdeI
| CA|TATG |
494 |
XbaI
| T|CTAGA |
427 |
Click here to view TAIR data
>AT5G19650.1 length:666
ATGGAGAAGA GAATGAAGCT CCGGGTTTCA AGAATAGTCC GGTCATCTTT | 50 |
AAGCTCTTGC CGACCACGAG ATCTATACGA CGTCGTCGAG ACTTGTGCTG | 100 |
TTACAAGTAA AGCAACGTCT TCCGAGAGGT TCTTCGTTAC CAAAGCCAAA | 150 |
ACCAAAACTC CATCACGACC AAAGAGTCAT GCTTCTTCTT GCCCTCGTGC | 200 |
GTCACCTATA TTCCCACCAA ACCCTTTCTA CGAAGAGAGC CGTTCATTTC | 250 |
GAGATTTAAG GAAGAAGGTC AAGACAAACA GGAAGCAAAG ATCGCAGTTT | 300 |
GGTTCTGACC CTCTCTTTGC CTCACGTTTT AAGTCAACCG GGTCTTGGTA | 350 |
CTGGTCTTGT AGTGAGGAAG AAGACGAAGG AGACAAAGAA GAAAGTGAAG | 400 |
ATGATGATTC TGATACTCTC TTTTCTTCTA GAAGCTTCTC CTCGGACTCT | 450 |
TCAAAGGCGG AGAGTTTTGC GGTGGTGAAG AAGTCAAAGG ATCCATATGA | 500 |
AGATTTCAGG ACGTCAATGG TGGAGATGAT TGTTGAGAGA CAGATATTTG | 550 |
CACCGGCTGA GTTACAACAG CTTCTTCAGT GTTTTTTGTC GTTAAACTCT | 600 |
CGTCAACACC ACAAAGTTAT TGTCCAAGTG TTCTTAGAAA TTTATGCCAC | 650 |
CTTGTTCTCT CCCTAA | 700 |
>AT5G19650.1 longest ORF length:221
MEKRMKLRVS RIVRSSLSSC RPRDLYDVVE TCAVTSKATS SERFFVTKAK | 50 |
TKTPSRPKSH ASSCPRASPI FPPNPFYEES RSFRDLRKKV KTNRKQRSQF | 100 |
GSDPLFASRF KSTGSWYWSC SEEEDEGDKE ESEDDDSDTL FSSRSFSSDS | 150 |
SKAESFAVVK KSKDPYEDFR TSMVEMIVER QIFAPAELQQ LLQCFLSLNS | 200 |
RQHHKVIVQV FLEIYATLFS P | 250 |
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