Locus |
Common name |
Short description |
AT5G19790 |
RAP2.11 |
related to AP2 11 (.1) |
>AT5G19790.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
627 |
SpeI
| A|CTAGT |
379 |
XhoI
| C|TCGAG |
173 |
Click here to view TAIR data
>AT5G19790.1 length:762
ATGGAACATC AAACAACTCC AAAGCAGAAA ACTAAGGAGA AGAGCAAAGG | 50 |
CAACAAGACT AAGTTTGTGG GAGTTAGGCA AAGGCCTTCA GGAAAATGGG | 100 |
TGGCAGAGAT CAAAGACACT ACACAAAAGA TACGGATGTG GCTCGGAACC | 150 |
TTTGAAACCG CAGAAGAAGC CGCTCGAGCC TACGATGAAG CTGCATGTCT | 200 |
CTTACGTGGC TCCAATACTC GCACCAATTT CGCAAACCAT TTTCCTAACA | 250 |
ACTCACAACT ATCTTTGAAG ATCAGAAATC TTCTTCACCA GAAGCAGAGC | 300 |
ATGAAGCAGC AGCAACAACA ACAACACAAA CCAGTTTCTT CTTTAACGGA | 350 |
TTGCAACATC AACTACATCT CGACTGCTAC TAGTCTCACC ACAACCACCA | 400 |
CCACCACCAC TACCACGGCC ATACCGCTCA ATAATGTGTA CCGACCAGAT | 450 |
TCATCGGTCA TTGGGCAACC AGAAACCGAG GGTCTCCAGC TTCCTTATTC | 500 |
GTGGCCCCTT GTCTCTGGAT TCAACCATCA GATTCCATTG GCTCAGGCAG | 550 |
GGGGAGAAAC ACATGGACAT CTCAACGATC ACTACTCAAC CGATCAACAT | 600 |
TTGGGTCTTG CAGAAATTGA AAGACAGATA TCTGCGTCCC TATATGCAAT | 650 |
GAATGGAGCT AACAGTTACT ATGACAACAT GAATGCAGAA TATGCAATTT | 700 |
TCGATCCTAC CGATCCCATT TGGGATCTCC CTTCACTCTC CCAACTCTTC | 750 |
TGCCCTACGT GA | 800 |
>AT5G19790.1 longest ORF length:253
MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT | 50 |
FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS | 100 |
MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD | 150 |
SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH | 200 |
LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF | 250 |
CPT | 300 |
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