fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G22240 ATOFP10, OFP10 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 10, Ovate family protein (.1)

>AT5G22240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 535
SalI G|TCGAC 460
SmaI CCC|GGG 231


Click here to view TAIR data

>AT5G22240.1 length:591
ATGCTGAATC TCCAAGCTAA GTTAAATGAA AAAAAGGTTC CTCTTTTAAC 
50
AAACTTTCCC ACACCAACAT CCTCACTCAA TAATCTCAAC TTGTTTTCTC 
100
TTCCTCTAGT AAAAAAAAAA ATGTCTTTCA AGAAGATGAT GAAGTATATA 
150
CTCAAAACCA TATTCAAACC CATTTTTATG GCATGCGGTT GCGGCTCTAC 
200
CGTTCCACCT TCCTCTCACA GCCACTACAC CCCGGGACCA CCGGTTTCTC 
250
CCACGGTTTT ACGCAGCCCA TGTCCTAAGA TCGATGAGAG CGTCGCGATG 
300
GCTAAAGAAT CAATCAATCC GTTCGAAGAT TACAAGAAGT CGATGAATCA 
350
GATGATCGAA GAGAGATATA TCGAGACGGA AAGTGAACTT AAGGAGCTTC 
400
TAAGGTGTTT CTTGGACATA AACCCTTCTC CTCAACACAA TCTCATCGTC 
450
CGTGCTTTTG TCGACGTCTG TTCACATCTC CAACCACCAC ACGACCGACG 
500
TGGGAAGTCA CTTGGGAGAT TGCTTCGTCT ATATGTTAAC AATCCTCTTG 
550
ATAACAATGA TGATGACTCA CACCAAACTT CTTCAAAATG A
600

>AT5G22240.1 longest ORF length:196
MLNLQAKLNE KKVPLLTNFP TPTSSLNNLN LFSLPLVKKK MSFKKMMKYI 
50
LKTIFKPIFM ACGCGSTVPP SSHSHYTPGP PVSPTVLRSP CPKIDESVAM 
100
AKESINPFED YKKSMNQMIE ERYIETESEL KELLRCFLDI NPSPQHNLIV 
150
RAFVDVCSHL QPPHDRRGKS LGRLLRLYVN NPLDNNDDDS HQTSSK
200