fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G22380 ANAC090 NAC domain containing protein 90 (.1)

>AT5G22380.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 691


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>AT5G22380.1 length:708
ATGGCCGATG AGGTCACAAT CGGGTTTCGC TTCTATCCCA CGGAAGAAGA 
50
ACTGGTTTCG TTCTACCTAC GAAACCAGCT CGAAGGAAGG AGTGATGACT 
100
CAATGCATCG TGTCATTCCC GTACTTGACG TCTTTGAGGT CGAGCCTAGT 
150
CATCTTCCAA ATGTTGCTGG AGTGAGATGT CGAGGAGACG CTGAGCAATG 
200
GTTCTTCTTC GTGCCACGAC AAGAACGCGA AGCAAGAGGA GGCAGACCGA 
250
GTAGAACTAC TGGTTCAGGA TACTGGAAAG CAACTGGATC ACCTGGTCCA 
300
GTCTTTTCCA AAGACAACAA AATGATTGGA GCAAAGAAAA CTATGGTTTT 
350
CTACACTGGA AAAGCACCCA CAGGAAGAAA AACTAAATGG AAAATGAATG 
400
AGTACCACGC CGTTGACGAA ACAGTCAACG CTTCCACAAT CCCTAAGCTG 
450
AGACGTGAGT TCAGTTTATG TCGAGTCTAC ATAACAACAG GAAGCTCCAG 
500
AGCTTTTGAT AGACGTCCTG AGGGAGTTTT GCAGACAGAG AGAATGCTAA 
550
CAAGTGATGT TGCAGTAGCT GAGACATCGT TCCGTGTGGA AAGCTCACTG 
600
GAAACTTCGA TTTCAGGAGG AGAACATATT GATGTCTCTA TGAACACAGA 
650
GTTTGTTGAT GGACTATCAG AACCGATGTG GGACTGGGAA CAGCTGACTT 
700
GGCCTTGA
750

>AT5G22380.1 longest ORF length:235
MADEVTIGFR FYPTEEELVS FYLRNQLEGR SDDSMHRVIP VLDVFEVEPS 
50
HLPNVAGVRC RGDAEQWFFF VPRQEREARG GRPSRTTGSG YWKATGSPGP 
100
VFSKDNKMIG AKKTMVFYTG KAPTGRKTKW KMNEYHAVDE TVNASTIPKL 
150
RREFSLCRVY ITTGSSRAFD RRPEGVLQTE RMLTSDVAVA ETSFRVESSL 
200
ETSISGGEHI DVSMNTEFVD GLSEPMWDWE QLTWP
250