fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G23000 ATMYB37, RAX1 REGULATOR OF AXILLARY MERISTEMS 1, myb domain protein 37 (.1)

>AT5G23000.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 582
EcoRI G|AATTC 793
NcoI C|CATGG 383
SacI GAGCT|C 8
StyI C|C[AT][AT]GG 46, 383


Click here to view TAIR data

>AT5G23000.1 length:990
ATGGGAAGAG CTCCGTGTTG CGACAAGACA AAAGTGAAGC GAGGGCCTTG 
50
GTCGCCTGAA GAAGACTCTA AACTTAGAGA TTACATTGAA AAGTATGGTA 
100
ATGGTGGAAA TTGGATCTCT TTCCCCCTCA AAGCCGGTTT GAGGAGATGT 
150
GGGAAGAGTT GTAGACTGAG GTGGCTAAAC TATTTGAGAC CAAACATAAA 
200
GCATGGTGAC TTCTCTGAGG AAGAAGACAG GATCATTTTT AGTCTCTTCG 
250
CTGCCATAGG AAGCAGGTGG TCAATAATAG CAGCTCATCT ACCGGGACGA 
300
ACAGACAACG ACATAAAAAA CTATTGGAAC ACAAAGCTAA GGAAGAAACT 
350
CTTGTCTTCT TCCTCTGATT CATCATCATC AGCCATGGCT TCTCCTTATC 
400
TAAACCCTAT TTCTCAGGAT GTGAAAAGAC CAACCTCACC AACAACAATC 
450
CCATCTTCTT CTTACAATCC GTATGCTGAA AACCCTAATC AATACCCAAC 
500
AAAATCCCTC ATCTCCAGCA TCAATGGCTT CGAAGCTGGT GACAAACAGA 
550
TAATTTCCTA TATTAACCCT AATTATCCTC AAGATCTCTA TCTCTCGGAC 
600
AGCAACAACA ACACCTCGAA CGCAAATGGT TTCTTGCTCA ACCACAATAT 
650
GTGTGATCAG TACAAGAACC ACACCAGTTT TTCTTCAGAC GTCAATGGGA 
700
TAAGATCAGA GATTATGATG AAGCAAGAAG AGATAATGAT GATGATGATG 
750
ATAGACCACC ACATTGACCA GAGGACAAAA GGGTACAATG GGGAATTCAC 
800
ACAAGGGTAT TATAATTACT ACAATGGGCA TGGGGATTTG AAGCAAATGA 
850
TTAGTGGAAC AGGCACTAAT TCTAACATAA ACATGGGTGG TTCAGGTTCA 
900
TCTTCTAGTT CGATAAGCAA CCTAGCTGAG AACAAAAGCA GTGGTAGCCT 
950
CCTACTAGAA TACAAATGCT TGCCCTATTT CTACTCCTAG 
1000

>AT5G23000.1 longest ORF length:329
MGRAPCCDKT KVKRGPWSPE EDSKLRDYIE KYGNGGNWIS FPLKAGLRRC 
50
GKSCRLRWLN YLRPNIKHGD FSEEEDRIIF SLFAAIGSRW SIIAAHLPGR 
100
TDNDIKNYWN TKLRKKLLSS SSDSSSSAMA SPYLNPISQD VKRPTSPTTI 
150
PSSSYNPYAE NPNQYPTKSL ISSINGFEAG DKQIISYINP NYPQDLYLSD 
200
SNNNTSNANG FLLNHNMCDQ YKNHTSFSSD VNGIRSEIMM KQEEIMMMMM 
250
IDHHIDQRTK GYNGEFTQGY YNYYNGHGDL KQMISGTGTN SNINMGGSGS 
300
SSSSISNLAE NKSSGSLLLE YKCLPYFYS
350