fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G23090 NF-YB13 "nuclear factor Y, subunit B13", nuclear factor Y, subunit B13 (.1.2.3.4)

>AT5G23090.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 3
BglII A|GATCT 120
PvuII CAG|CTG 371
SacI GAGCT|C 344
StyI C|C[AT][AT]GG 29


Click here to view TAIR data

>AT5G23090.1 length:480
ATGGATCCAA TGGATATAGT CGGCAAATCC AAGGAAGACG CTTCTCTTCC 
50
AAAAGCTACG ATGACTAAAA TTATAAAGGA GATGTTACCA CCAGATGTTC 
100
GTGTTGCAAG AGATGCTCAA GATCTTCTCA TTGAATGTTG TGTAGAGTTT 
150
ATAAATCTTG TATCTTCAGA ATCTAATGAT GTTTGTAACA AAGAGGATAA 
200
ACGGACGATT GCTCCTGAGC ATGTTCTCAA GGCATTACAG GTTCTTGGTT 
250
TTGGAGAATA CATTGAAGAA GTCTATGCTG CGTATGAGCA ACATAAGTAT 
300
GAAACAATGC AGGACACACA GAGGAGCGTG AAATGGAACC CTGGAGCTCA 
350
AATGACTGAG GAGGAAGCAG CAGCTGAGCA ACAACGTATG TTTGCAGAAG 
400
CACGTGCAAG AATGAATGGA GGTGTTTCGG TTCCTCAACC TGAACATCCA 
450
GAAACTGACC AGAGAAGTCC GCAAAGCTAA 
500

>AT5G23090.1 longest ORF length:159
MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF 
50
INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY 
100
ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP 
150
ETDQRSPQS
200