Locus |
Common name |
Short description |
AT5G23090 |
NF-YB13 |
"nuclear factor Y, subunit B13", nuclear factor Y, subunit B13 (.1.2.3.4) |
>AT5G23090.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
3 |
BglII
| A|GATCT |
120 |
PvuII
| CAG|CTG |
371 |
SacI
| GAGCT|C |
344 |
StyI
| C|C[AT][AT]GG |
29 |
Click here to view TAIR data
>AT5G23090.2 length:480
ATGGATCCAA TGGATATAGT CGGCAAATCC AAGGAAGACG CTTCTCTTCC | 50 |
AAAAGCTACG ATGACTAAAA TTATAAAGGA GATGTTACCA CCAGATGTTC | 100 |
GTGTTGCAAG AGATGCTCAA GATCTTCTCA TTGAATGTTG TGTAGAGTTT | 150 |
ATAAATCTTG TATCTTCAGA ATCTAATGAT GTTTGTAACA AAGAGGATAA | 200 |
ACGGACGATT GCTCCTGAGC ATGTTCTCAA GGCATTACAG GTTCTTGGTT | 250 |
TTGGAGAATA CATTGAAGAA GTCTATGCTG CGTATGAGCA ACATAAGTAT | 300 |
GAAACAATGC AGGACACACA GAGGAGCGTG AAATGGAACC CTGGAGCTCA | 350 |
AATGACTGAG GAGGAAGCAG CAGCTGAGCA ACAACGTATG TTTGCAGAAG | 400 |
CACGTGCAAG AATGAATGGA GGTGTTTCGG TTCCTCAACC TGAACATCCA | 450 |
GAAACTGACC AGAGAAGTCC GCAAAGCTAA | 500 |
>AT5G23090.2 longest ORF length:159
MDPMDIVGKS KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF | 50 |
INLVSSESND VCNKEDKRTI APEHVLKALQ VLGFGEYIEE VYAAYEQHKY | 100 |
ETMQDTQRSV KWNPGAQMTE EEAAAEQQRM FAEARARMNG GVSVPQPEHP | 150 |
ETDQRSPQS | 200 |
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