fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G23090 NF-YB13 "nuclear factor Y, subunit B13", nuclear factor Y, subunit B13 (.1.2.3.4)

>AT5G23090.3 CDS map

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Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 3
BglII A|GATCT 81
PvuII CAG|CTG 332
SacI GAGCT|C 305
StyI C|C[AT][AT]GG 29


Click here to view TAIR data

>AT5G23090.3 length:441
ATGGATCCAA TGGATATAGT CGGCAAATCC AAGGAAGACG CTTCTCTTCC 
50
AAAAGATGTT CGTGTTGCAA GAGATGCTCA AGATCTTCTC ATTGAATGTT 
100
GTGTAGAGTT TATAAATCTT GTATCTTCAG AATCTAATGA TGTTTGTAAC 
150
AAAGAGGATA AACGGACGAT TGCTCCTGAG CATGTTCTCA AGGCATTACA 
200
GGTTCTTGGT TTTGGAGAAT ACATTGAAGA AGTCTATGCT GCGTATGAGC 
250
AACATAAGTA TGAAACAATG CAGGACACAC AGAGGAGCGT GAAATGGAAC 
300
CCTGGAGCTC AAATGACTGA GGAGGAAGCA GCAGCTGAGC AACAACGTAT 
350
GTTTGCAGAA GCACGTGCAA GAATGAATGG AGGTGTTTCG GTTCCTCAAC 
400
CTGAACATCC AGAAACTGAC CAGAGAAGTC CGCAAAGCTA A
450

>AT5G23090.3 longest ORF length:146
MDPMDIVGKS KEDASLPKDV RVARDAQDLL IECCVEFINL VSSESNDVCN 
50
KEDKRTIAPE HVLKALQVLG FGEYIEEVYA AYEQHKYETM QDTQRSVKWN 
100
PGAQMTEEEA AAEQQRMFAE ARARMNGGVS VPQPEHPETD QRSPQS
150