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| Locus | Common name | Short description |
| AT5G23260 | ABS, TT16, AGL32 | TRANSPARENT TESTA16, AGAMOUS-like 32, ARABIDOPSIS BSISTER, K-box region and MADS-box transcription factor family protein (.1.2.3) |
>AT5G23260.3 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AflIII | A|CPuPyGT | 298, 452 |
| AluI | AG|CT | 99, 156, 309, 363, 384, 499, 546, 621, 666 |
| AvaI | C|PyCGPuG | 376 |
| BanII | GPuGCPy|C | 100 |
| BclI | T|GATCA | 240 |
| BfaI | C|TAG | 386, 431, 584 |
| BlpI | GC|TNAGC | 674 |
| BsaJI | C|CNNGG | 330, 520, 565 |
| BsaWI | [AT]|CCGG[AT] | 151 |
| BsiHKAI | G[AT]GC[AT]|C | 100 |
| BslI | CCNNNNN|NNGG | 275, 330, 520 |
| BsoBI | C|PyCGPuG | 376 |
| Bsp1286I | G[GAT]GC[CAT]|C | 100 |
| BspHI | T|CATGA | 246, 468 |
| BsrI | ACTGGN| | 76 |
| BssKI | |CCNGG | 254, 519, 564 |
| BssSI | C|TCGTG | 95 |
| BstF5I | GGATGNN| | 189, 429 |
| BstNI | CC|[AT]GG | 254, 519, 564 |
| BtgI | C|CPuPyGG | 330 |
| Cac8I | GCN|NGC | 624, 669 |
| DdeI | C|TNAG | 143, 285, 341, 640, 673 |
| DpnI | GA-CH3|TC | 239, 647, 692 |
| DpnII | |GATC | 239, 647, 692 |
| Fnu4HI | GC|NGC | 480, 545, 590 |
| HaeIII | GG|CC | 700 |
| HindIII | A|AGCTT | 157 |
| HinfI | G|ANTC | 35, 92, 373 |
| HpaII | C|CGG | 150 |
| Hpy188I | TCN|GA | 38, 162, 174, 639 |
| HpyCH4III | ACN|GT | 457, 533 |
| HpyCH4V | TG|CA | 213, 264, 478 |
| MboI | |GATC | 239, 647, 692 |
| MfeI | C|AATTG | 262 |
| MseI | T|TAA | 712 |
| MslI | CAPyNN|NNPuTG | 335 |
| MspI | C|CGG | 150 |
| MwoI | GCNNNNN|NNGC | 317, 470, 674 |
| NcoI | C|CATGG | 330 |
| NlaIII | CATG| | 245, 269, 297, 329, 335, 451, 467 |
| NspI | PuCATG|Py | 298, 452 |
| PaeR7I | C|TCGAG | 376 |
| PciI | A|CATGT | 298, 452 |
| PflMI | CCANNNN|NTGG | 275, 330 |
| PsiI | TTA|TAA | 83 |
| PspGI | |CC[AT]GG | 254, 519, 564 |
| RsaI | GT|AC | 454 |
| SacI | GAGCT|C | 100 |
| Sau3AI | |GATC | 239, 647, 692 |
| Sau96I | G|GNCC | 701 |
| ScrFI | CC|NGG | 254, 519, 564 |
| SmlI | C|TPyPuAG | 307, 376 |
| StyI | C|C[AT][AT]GG | 330 |
| Taqƒ¿I | T|CGA | 375 |
| TfiI | G|A[AT]TC | 35 |
| TliI | C|TCGAG | 376 |
| TseI | G|C[AT]GC | 480, 545, 590 |
| Tsp45I | |GT[CG]AC | 54, 115 |
| Tsp509I | |AATT | 261 |
| TspRI | NNCA[CG]TGNN| | 554 |
| XbaI | T|CTAGA | 585 |
| XhoI | C|TCGAG | 376 |
| XmnI | GAANN|NNTTC | 159 |
Click here to view TAIR data
>AT5G23260.3 length:717
ATGGGTAGAG GGAAGATAGA GATAAAGAAG ATAGAGAATC AGACGGCGAG | 50 |
GCAAGTGACC TTCTCCAAGA GAAGAACTGG TCTTATAAAG AAGACTCGTG | 100 |
AGCTCTCTAT TCTCTGTGAC GCTCACATCG GTCTCATCGT CTTCTCAGCC | 150 |
ACCGGAAAGC TTTCCGAGTT CTGCTCCGAA CAGAACAGGA TGCCTCAACT | 200 |
CATTGACCGA TACTTGCATA CCAACGGATT GCGACTTCCT GATCATCATG | 250 |
ACGACCAGGA GCAATTGCAC CATGAGATGG AACTACTAAG AAGAGAGACA | 300 |
TGTAACCTTG AGCTTCGTCT GCGTCCATTC CATGGACATG ACTTAGCCTC | 350 |
CATTCCTCCT AATGAGCTTG ACGGACTCGA GAGACAGCTA GAACATTCTG | 400 |
TCCTCAAAGT CCGTGAGCGT AAGAGGAGGA TGCTAGAAGA AGATAACAAC | 450 |
AACATGTACC GTTGGCTTCA TGAGCATCGT GCAGCGATGG AGTTTCAACA | 500 |
AGCTGGGATA GATACCAAAC CAGGGGAGTA TCAACAGTTT ATAGAGCAGC | 550 |
TTCAGTGCTA TAAACCAGGG GAGTATCAGC AGTTTCTAGA GCAGCAGCAA | 600 |
CAACAACCAA ACAGCGTTCT TCAGCTTGCT ACACTTCCTT CTGAGATTGA | 650 |
TCCTACTTAC AATCTCCAGC TTGCTCAGCC TAATCTTCAA AACGATCCAA | 700 |
CGGCCCAGAA TGATTAA | 750 |
>AT5G23260.3 longest ORF length:238
MGRGKIEIKK IENQTARQVT FSKRRTGLIK KTRELSILCD AHIGLIVFSA | 50 |
TGKLSEFCSE QNRMPQLIDR YLHTNGLRLP DHHDDQEQLH HEMELLRRET | 100 |
CNLELRLRPF HGHDLASIPP NELDGLERQL EHSVLKVRER KRRMLEEDNN | 150 |
NMYRWLHEHR AAMEFQQAGI DTKPGEYQQF IEQLQCYKPG EYQQFLEQQQ | 200 |
QQPNSVLQLA TLPSEIDPTY NLQLAQPNLQ NDPTAQND | 250 |