fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G24050 Domain of unknown function (DUF313) (.1)

>AT5G24050.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 154
NcoI C|CATGG 1007
SpeI A|CTAGT 4
StyI C|C[AT][AT]GG 1007


Click here to view TAIR data

>AT5G24050.1 length:1050
ATGACTAGTA TCTATCACGA TGATGACGAT CATCTCACGG CTTCAGGTAA 
50
AGACCTGTGG TCGAATTTCT GTGTACTGGT TGATGCGGCG GTTATGTTAT 
100
ATGAAGAAGA AGAAGAAGAA CAACGTCGTA AGATTGTCTC TGAAGAAGAA 
150
GAAGAATTCC AGAAGAGAAT CTTTTGTCTC TTCCCGAGAA AAACAAGATC 
200
GTCTTTGGTG AAGAGACAAC AAAATCTTAT TAGGGTTTCT ACTTCTTCAT 
250
CGCTTATCGA TCTTAACCAG TTCCCTACCG ATTCTGAGAT CGAAGACCCA 
300
CAAAACCATC TTCAAGGGCT ATCCTCTTCA TGTTTCATTG CCGCTAATTC 
350
CGAGACAAAA ACATTACAAA ACCCTAGTTC AGAACCTTGT TCTTCACTCG 
400
GACTCTTTGG TCACAAGACG GCTGAGTACC AAAAGACGGA GACGAAAGAC 
450
CCACCAAACC CTAATTTCCC ATGTACTATG TCTTTGTGCC TAATGGAGAA 
500
CACAAGCCGC AAGAGACGTG CTGTGGAACA AAGGAAGCGT AGTGGTGGAG 
550
TCAAGAAAGC AAATGTTGCT CCTTTTTCAC AAACGGCGAG AGAGACACCT 
600
GAGTGGCTTG TCAAGGTGAT GACAAACATG AAAGAAGCCA AAGACGCTAA 
650
ATTGATCTTT GAGAAGACTC TGTTCGTGAC TGATGTAAAC CCAACAAAGA 
700
ACCGTCTCTC AATGCCTTTC AACAACTTAC TCCGAAACGA TTTCCTGACG 
750
TCTGTGGAGT CCATAATCAT AAACGAAGAC ATCAACAACA ATAACAAGAT 
800
TGGAGTGGGA GCGATTCTCG TGGATCAACG GTGTAAAAAG TGGGGTGTGA 
850
TGTTAAAGAG ATGGGAGATG AAGAAGGAAT CAGGTAAAGG AAGCTGGAGT 
900
TACAATTTGA TTTGTGGGTG GAACGACATC GTTGAGGCTA ACAGATTGAA 
950
AGAAGGCGAC AACATTACTC TTTGGTCGTT TAGGTGCTGT GGAATCCTCT 
1000
GCTTTGCCAT GGAACAGAGT AGCTCTTCCC TTGCTCTCTG TCTCTGCTAA 
1050

>AT5G24050.1 longest ORF length:349
MTSIYHDDDD HLTASGKDLW SNFCVLVDAA VMLYEEEEEE QRRKIVSEEE 
50
EEFQKRIFCL FPRKTRSSLV KRQQNLIRVS TSSSLIDLNQ FPTDSEIEDP 
100
QNHLQGLSSS CFIAANSETK TLQNPSSEPC SSLGLFGHKT AEYQKTETKD 
150
PPNPNFPCTM SLCLMENTSR KRRAVEQRKR SGGVKKANVA PFSQTARETP 
200
EWLVKVMTNM KEAKDAKLIF EKTLFVTDVN PTKNRLSMPF NNLLRNDFLT 
250
SVESIIINED INNNNKIGVG AILVDQRCKK WGVMLKRWEM KKESGKGSWS 
300
YNLICGWNDI VEANRLKEGD NITLWSFRCC GILCFAMEQS SSSLALCLC
350