fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G25190 ESE3 ethylene and salt inducible 3, Integrase-type DNA-binding superfamily protein (.1)

>AT5G25190.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 226
SacI GAGCT|C 173


Click here to view TAIR data

>AT5G25190.1 length:546
ATGGCACGAC CACAACAACG CTTTCGAGGC GTTAGACAGA GGCATTGGGG 
50
CTCTTGGGTC TCCGAAATTC GTCACCCTCT CTTGAAAACA AGAATCTGGC 
100
TAGGGACGTT TGAGACAGCG GAGGATGCAG CAAGGGCCTA CGACGAGGCG 
150
GCTAGGCTAA TGTGTGGCCC GAGAGCTCGT ACTAATTTCC CATACAACCC 
200
TAATGCCATT CCTACTTCCT CTTCCAAGCT TCTATCAGCA ACTCTTACCG 
250
CTAAACTCCA CAAATGCTAC ATGGCTTCTC TTCAAATGAC CAAGCAAACG 
300
CAAACACAAA CGCAAACGCA GACCGCAAGA TCACAATCCG CGGACAGTGA 
350
CGGTGTGACG GCTAACGAAA GTCATTTGAA CAGAGGAGTA ACGGAGACGA 
400
CAGAGATCAA GTGGGAAGAT GGAAATGCGA ATATGCAACA GAATTTTAGG 
450
CCATTGGAGG AAGATCATAT CGAGCAAATG ATTGAGGAGC TGCTTCACTA 
500
CGGTTCCATT GAGCTTTGCT CTGTTTTACC AACTCAGACG CTGTGA
550

>AT5G25190.1 longest ORF length:181
MARPQQRFRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA 
50
ARLMCGPRAR TNFPYNPNAI PTSSSKLLSA TLTAKLHKCY MASLQMTKQT 
100
QTQTQTQTAR SQSADSDGVT ANESHLNRGV TETTEIKWED GNANMQQNFR 
150
PLEEDHIEQM IEELLHYGSI ELCSVLPTQT L
200