Locus |
Common name |
Short description |
AT5G25470 |
|
AP2/B3-like transcriptional factor family protein (.1.2) |
>AT5G25470.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
216, 689 |
EcoRV
| GAT|ATC |
502 |
SmaI
| CCC|GGG |
136 |
StyI
| C|C[AT][AT]GG |
7 |
Click here to view TAIR data
>AT5G25470.2 length:843
ATGTTGCCTA GGAATGCTAC TGATAAGATA CAAGGAAATG TGAGCAAGCC | 50 |
TTGCTTTTGG AAGTCTCTGT CTCCAGGACA AAACTGGAAA TCTAAATCCA | 100 |
TGAGGAGTTT TCCGGAAGAG TTTGTGAAAA GCACGCCCGG GGCTTTTGAG | 150 |
CACAGAGTTG TGTTCAGTGT TCGTTGGGGC AATTCTTGGC AACTCTGGCT | 200 |
GGAGCGAGAA GAAAAAGATC TGTTTATGAT AGAAGAAGAT TGGGATGAGT | 250 |
TTGTGGATGA CAACCATTTA GGCCCAAATG ATAACGTGTT CTTCAGACAC | 300 |
GATGACAAGA TGTTTCTTGA AGTGCAAATC TTTAAGAATG ATGGGAACGA | 350 |
GATCATCGAT GCACCTCCTG AAGTTGAACC TGAAACTGAA CCATTTCATC | 400 |
CTACTACACC AAAAAATTCT CACAAGGAGA CAACCACTGC CTCTGCCTCT | 450 |
GCTTCTGCTT CTGAATTTTC AGACAATTGG CGAGAGACAC ATGGTTGTGC | 500 |
TGATATCAAA AACCCTGAGC TGTACCTTCT AAACCCCAAA AACCCTTACT | 550 |
TTGTGAAAAC GCTGACAAAA GGGAATGACG TTTTGTATGT GCCCAAAACA | 600 |
GTGATTAAGA AGTATGGCTT GAAGTTTGGT CCCCATTTGT CCCCCATGCA | 650 |
TTACCTTCTT CCCGGAGATA AAATAAATGG CTCCACTAAG ATCTATGGCG | 700 |
GTGGCAGTGC CCCTTGTTTC AATGGCTGGG TGGACCTATG TCGAAAGTAC | 750 |
AATCTGAAAA CCGGAGACTC TATGGTTTGT GAACTTGAAC GCTCTGGAGA | 800 |
ACTGGTTACT GCTGTTAGAG TGCACTTCAT CAATAAAACA TGA | 850 |
>AT5G25470.2 longest ORF length:280
MLPRNATDKI QGNVSKPCFW KSLSPGQNWK SKSMRSFPEE FVKSTPGAFE | 50 |
HRVVFSVRWG NSWQLWLERE EKDLFMIEED WDEFVDDNHL GPNDNVFFRH | 100 |
DDKMFLEVQI FKNDGNEIID APPEVEPETE PFHPTTPKNS HKETTTASAS | 150 |
ASASEFSDNW RETHGCADIK NPELYLLNPK NPYFVKTLTK GNDVLYVPKT | 200 |
VIKKYGLKFG PHLSPMHYLL PGDKINGSTK IYGGGSAPCF NGWVDLCRKY | 250 |
NLKTGDSMVC ELERSGELVT AVRVHFINKT | 300 |
|