fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G26660 ATMYB4, ATMYB86 myb domain protein 86 (.1)

>AT5G26660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 225, 1024
NcoI C|CATGG 514
NheI G|CTAGC 769
SacI GAGCT|C 238
SpeI A|CTAGT 798
StyI C|C[AT][AT]GG 514


Click here to view TAIR data

>AT5G26660.1 length:1059
ATGGGAAGAC ATTCTTGTTG TTTTAAGCAG AAGCTAAGAA AAGGCCTTTG 
50
GTCTCCTGAA GAAGATGAGA AACTTCTCAA TTACATCACT AGACATGGTC 
100
ATGGCTGTTG GAGTTCTGTC CCTAAACTCG CAGGTTTGCA AAGATGTGGA 
150
AAGAGTTGTA GACTTAGGTG GATAAATTAT TTGAGACCAG ATTTAAAGAG 
200
AGGAGCTTTC TCTCAAGACG AAGAAAGCTT GATCATTGAG CTCCATGCTG 
250
CATTAGGCAA CAGATGGTCT CAAATCGCAA CGCGGTTACC GGGAAGAACA 
300
GACAACGAGA TCAAAAACTT TTGGAACTCA TGTCTTAAGA AGAAGCTGAG 
350
AAGAAAAGGC ATTGACCCAA CAACACATAA ACCCTTAATA ACAAACGAGC 
400
TTCAATCTCT TAACGTCATA GATCAGAAAC TGACGTCATC AGAAGTAGTA 
450
AAGTCAACGG GTTCGATAAA CAACCTACAT GATCAGTCAA TGGTCGTCTC 
500
ATCGCAACAA GGTCCATGGT GGTTCCCGGC GAATACAACT ACGACTAATC 
550
AAAACTCTGC GTTTTGCTTT AGTTCAAGTA ATACTACAAC GGTTTCAGAC 
600
CAGATCGTAT CTTTAATCTC TTCAATGTCT ACGTCATCAT CTCCGACACC 
650
AATGACTTCA AACTTCAGTC CTGCTCCAAA CAACTGGGAA CAACTCAACT 
700
ACTGCAACAC AGTACCAAGT CAGAGCAACA GTATCTACAG TGCCTTCTTT 
750
GGTAATCAAT ACACAGAAGC TAGCCAAACC ATGAACAATA ATAATCCACT 
800
AGTAGATCAA CATCATCATC ATCAAGACAT GAAGTCATGG GCATCAGAGA 
850
TTCTTCATTA CACAGAACAC AACCAAAGCT CAGAAACTGT TATAGAAGCA 
900
GAAGTGAAGC CAGACATTGC CAACTACTAC TGGAGATCAG CATCATCATC 
950
GTCGTCACCA AACCAAGAAG CTGCAACATT ACTACACGAT GCTAACGTGG 
1000
AAGTGTACGG TAAAAATCTA CAAAAGCTTA ATAACATGGT GTTTGATCAG 
1050
AGCCTTTAG
1100

>AT5G26660.1 longest ORF length:352
MGRHSCCFKQ KLRKGLWSPE EDEKLLNYIT RHGHGCWSSV PKLAGLQRCG 
50
KSCRLRWINY LRPDLKRGAF SQDEESLIIE LHAALGNRWS QIATRLPGRT 
100
DNEIKNFWNS CLKKKLRRKG IDPTTHKPLI TNELQSLNVI DQKLTSSEVV 
150
KSTGSINNLH DQSMVVSSQQ GPWWFPANTT TTNQNSAFCF SSSNTTTVSD 
200
QIVSLISSMS TSSSPTPMTS NFSPAPNNWE QLNYCNTVPS QSNSIYSAFF 
250
GNQYTEASQT MNNNNPLVDQ HHHHQDMKSW ASEILHYTEH NQSSETVIEA 
300
EVKPDIANYY WRSASSSSSP NQEAATLLHD ANVEVYGKNL QKLNNMVFDQ 
350
SL
400