fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G26930 GATA23 GATA transcription factor 23 (.1)

>AT5G26930.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 3
HindIII A|AGCTT 225
StyI C|C[AT][AT]GG 7


Click here to view TAIR data

>AT5G26930.1 length:363
ATGGATCCAA GGAAGCTACT ATCTTGTTCA TCCTCTTACG TGTCAGTGAG 
50
AATGAAAGAA GAGAAGGGGA CAATTAGGTG TTGCAGTGAG TGTAAGACCA 
100
CCAAGACACC AATGTGGAGA GGTGGACCAA CTGGTCCTAA GTCACTTTGC 
150
AATGCATGTG GAATTAGACA CAGAAAACAG AGACGATCAG AGTTATTGGG 
200
TATTCATATT ATTCGCAGCC ACAAAAGCTT AGCCTCCAAG AAGATAAACC 
250
TATTATCATC ATCACACGGT GGCGTGGCGG TGAAGAAACG AAGGAGTCTA 
300
AAGGAGGAAG AACAAGCTGC TTTGTGTCTA TTGTTATTGT CTTGTAGCTC 
350
TGTTTTGGCC TAA
400

>AT5G26930.1 longest ORF length:120
MDPRKLLSCS SSYVSVRMKE EKGTIRCCSE CKTTKTPMWR GGPTGPKSLC 
50
NACGIRHRKQ RRSELLGIHI IRSHKSLASK KINLLSSSHG GVAVKKRRSL 
100
KEEEQAALCL LLLSCSSVLA 
150