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| Locus | Common name | Short description |
| AT5G27090 | AGL54 | AGAMOUS-like 54 (.1.2) |
>AT5G27090.2 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MwoI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 15, 302 |
| AluI | AG|CT | 147, 321, 368 |
| ApoI | Pu|AATTPy | 105 |
| AvaI | C|PyCGPuG | 340 |
| BsaJI | C|CNNGG | 143 |
| BsoBI | C|PyCGPuG | 340 |
| BstYI | Pu|GATCPy | 239 |
| DdeI | C|TNAG | 235, 272 |
| DpnI | GA-CH3|TC | 227, 238, 422 |
| DpnII | |GATC | 227, 238, 422 |
| DrdI | GACNNNN|NNGTC | 172 |
| EaeI | Py|GGCCPu | 220 |
| HaeIII | GG|CC | 219 |
| HindIII | A|AGCTT | 322 |
| HinfI | G|ANTC | 3, 155, 285 |
| HpaII | C|CGG | 221 |
| Hpy188I | TCN|GA | 261, 365 |
| HpyCH4IV | A|CGT | 11, 389 |
| HpyCH4V | TG|CA | 88 |
| MboI | |GATC | 227, 238, 422 |
| MseI | T|TAA | 132 |
| MspI | C|CGG | 221 |
| NlaIII | CATG| | 127, 216 |
| RsaI | GT|AC | 308 |
| Sau3AI | |GATC | 227, 238, 422 |
| StyI | C|C[AT][AT]GG | 143 |
| Taqƒ¿I | T|CGA | 110, 152, 168 |
| TfiI | G|A[AT]TC | 3, 285 |
| Tsp45I | |GT[CG]AC | 196 |
| Tsp509I | |AATT | 33, 104, 255 |
Click here to view TAIR data
>AT5G27090.2 length:474
ATGGATTCTT CAACGTCTAC GAAGAAGAAT ACCAAATTGT TTGTAAGAAA | 50 |
CCAAACTTGT TTCAAGAAAT CGTCTCTGTC TTCTTCCAAT GCAAAAAAGA | 100 |
CCACGAATTT GTCGATGAGA GAACAGACCA TGTTTAAGAA AGCCTTGGAG | 150 |
CTTTCGACTC TGTGCGACAT CGAAGTCTGT GTCATATACT ATGGTCGTGA | 200 |
CGGAAAACTC ATCAAGACAT GGCCGGAAGA TCAATCTAAG ATCCTCCACG | 250 |
ACAAGAAATT GTCGGAGAAA GTCTTAGAGA TGGAGGATTC GTTAGAAAGT | 300 |
GGTCTACGGG TACTACAAGA TAAGCTTCTG TTACTCCAAC CCGAGAAAAA | 350 |
CCAGACCGAG TTAGGTCAGA GCTGTGCGGT TTATTCCACA ACGTATCCAT | 400 |
TGTCTTCTCC TTCGCTGATT GAGGATCATC AACATCAACA ACAATGGACA | 450 |
GAACCATTGT CAAACACAGA GTAA | 500 |
>AT5G27090.2 longest ORF length:157
MDSSTSTKKN TKLFVRNQTC FKKSSLSSSN AKKTTNLSMR EQTMFKKALE | 50 |
LSTLCDIEVC VIYYGRDGKL IKTWPEDQSK ILHDKKLSEK VLEMEDSLES | 100 |
GLRVLQDKLL LLQPEKNQTE LGQSCAVYST TYPLSSPSLI EDHQHQQQWT | 150 |
EPLSNTE | 200 |