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| Locus | Common name | Short description |
| AT5G27610 | ATALY1 | ARABIDOPSIS THALIANA ALWAYS EARLY 1, ALWAYS EARLY 1, DIRP ;Myb-like DNA-binding domain (.1) |
>AT5G27610.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 61, 2266 |
| HindIII | A|AGCTT | 509, 2528 |
| PstI | CTGCA|G | 206, 2377 |
| PvuII | CAG|CTG | 1369 |
| SacI | GAGCT|C | 929 |
Click here to view TAIR data
>AT5G27610.1 length:2916
ATGGCGCCTA CTAGGAAGTC GAAGAGTGTG AACAAGCGTT TCACCAATGA | 50 |
AGCGTCTCCA GATATCAATT TTGGGAGCGC AAGCAAAACC AAGCAAAGAA | 100 |
AGAAGAAATT GGCTGATAAG CTGGGACCTC AGTGGACCAA AAGGGAGCTT | 150 |
GTGCGTTTCT ATGATGCTTA TAGGAAGTAT GTGGGAGACT GGAAAAAGGT | 200 |
AGCTGCTGCA GTACGGAATA ACCGGTCTGT TGAGATGGTC GAAACACTCT | 250 |
TTTGTATGAA TCGGGCATAC TTATCCTTGC CCGAGGGAAC TGCTTCTGTA | 300 |
GCTGGCCTTA TTGCAATGAT GACTGATCAC TACAGCGTCA TGGAGGGGAG | 350 |
CGAAAGTGAA GGAGAAGACC ATGATGCTTC TGAGGTAACG AGGAAACATC | 400 |
TGAAGCGCAA ACGTCCTCAA GTTCTGCCTA GTGATTTTCG AGAAGAAGTT | 450 |
GTTCCACCAC ATTCAGTTGC ATCAGTAGAA GGATGTCTCT CATTCTTGAA | 500 |
GCAGACACAA GCTTATGAAA AAAGGCAACG GGCCACTGGA AAACGTACAC | 550 |
CTCGGTTTCT TGTCGCAATT ACACATGAGA GGGATGATAT AGAAGATTTT | 600 |
AGTCCACCAA ATAAAAGAGC CAAGAAACAA CTTGATGCCG ATGATGATGC | 650 |
ATCAAGAAGG GGAGGAGGGT CTCCATACAG AAGAAAAGAA CTCAGTGAAA | 700 |
TCACACCAAC TAGGCTTAGG AAAACGTCAC AAGCACAGGA AGCACAATTC | 750 |
AAGCACCCTG ATAGTTCCAT GTTTGAGAAT GGGGTGAGAG ATAGATGGCA | 800 |
TAAAAAGGGA GCTGCTGATA GAGATGGTGC CTTGTTGATG GATATGGAAG | 850 |
GACTTGTTAC CCAAAAGGAA AAAATTGTGA GAGTTGAAGA AGCAGAAGGA | 900 |
AATTATTCTG ATGATGATGA TGGATTAGGA GCTCTGAAGA CATTGGCTGA | 950 |
AATGTCAGCT TCACTGGCTC CGGCTGGTTT GTTGGAATCA GAATCATCTC | 1000 |
CACACTGGGA AGAAGAAAGA AAAACTAACA ACGTGGATAA GAAATCTAAC | 1050 |
ACTCTGGAAA CCGTGTCAAC AAGCCATCAC AGAGAAAAAG CAAAACAAGC | 1100 |
AGGACTAGAA GATAATCTCC TGCATGCAAT TTCAGCCCCT GATAAAAGAA | 1150 |
AACCGAAGTC TGTGCCGGAA TCCGTTGATG GTAATGTTGT TTCCATCGAG | 1200 |
GAGCTTCGCA CTTCAAGCAG AAAACGTAAA CCAAAGTTTC AGGTGCTAGA | 1250 |
TGTTGTAGCT CCAAAAGAGT CTACACAGGA CAAATCTCTA TATACTAAGG | 1300 |
AATCGGCTGA AGTTGATAGT TTGAAGACTC CCGTCAAAGC AAGACGTTCT | 1350 |
AGTCAAGGTC CAGCAAAACA GCTGAAAACT GCAAAGACCA CGGTAGAATC | 1400 |
TTCTTCAGCT AGTGATAAGA AAATAACTGG ACCGGATGCA GTAGTGCCAG | 1450 |
CTACACAAGT TTCAGCTTCG GGTCCAGAGA CTTTGCCACA GAAACCACCA | 1500 |
AACAGGCGTA AGATAAGTTT GAAGAAAAGT TTACAAGAAA GAGCTAAATC | 1550 |
TTTAGAAACC ACTCATGACA AACCACGTAG TTTCAAAAAA CTTTCAGAAC | 1600 |
ATGAATTACT ACAGGAGAAG TTGTCAAATT GTCTGTCATA TCCATTGGTA | 1650 |
CGTCGATGGT GCATATATGA ATGGTTCTAC AGTGCTATTG ACTATCCCTG | 1700 |
GTTTGCAAAG ATGGAGTTCA CTGATTATCT AAATCATGTG GGGCTTGGTC | 1750 |
ACGCTCCAAG ACTTACTCGT GTTGAATGGA GTGTCATTAA AAGTTCTCTC | 1800 |
GGTAGACCTC GGAGATTGTC TCAGAGATTC CTACAGGATG AGCGGGATAA | 1850 |
ACTCCAAGAA TATCGTGAGT CTGTGAGAAA GCATTATACA GAGCTGCGTG | 1900 |
GATGTGCTAC GGGAGTGCTT CATACAGATT TGGCCCGTCC TTTATCAGTC | 1950 |
GGGAATAGAG TGATTGCCAT CCATCCTAAA ACACGGGAGA TTCGTGATGG | 2000 |
CAAGATTCTT ACTGTGGATC ATAACAAGTG CAACGTTCTC TTTGATGAAT | 2050 |
TGGGTGTCGA GTTAGTTATG GACATTGACT GCATGCCTTT AAATCCATTG | 2100 |
GAATACATGC CAGAGGGTCT AAGGAGGCAA ATTGATAAGT GCTTGGCTAT | 2150 |
ATGCAAAGAA GCAAGGCTTA ACAGACACCC AAGCTCTGAT GCATCTGTTC | 2200 |
TGTTCTCTCC TTCTGTGCTT GAAAATGTCA ACTTTTCCAT GAATCCTCCT | 2250 |
CCTGCGAAAC AGGATGATAT CAGAGAGCCA GTTTTGTATG GTAAAGTAAT | 2300 |
AGCAACCAAC ACTACTGATC AATCTATCGT AATCAATAGC AAAGTAACAG | 2350 |
GAACAGAAAT TCAACGGACT CTGGCACTGC AGCATACTTC CGATGCGCAG | 2400 |
GAAATGGAGC CAGAAATGAT TGAAATTGTC ATTGAATCAA AGTCAATAGC | 2450 |
GCAAGCAATG GTGGATGCAG CTATAAAGGC TGCATCGTCG GGGAAGAACA | 2500 |
ATGAAGACTC AGAGAATATG GTTCACCAAG CTTTAAGCTC CATTGGCGAA | 2550 |
CATCAGCCAT TAGACAACTC TATAGTGCCT GGTATCAAGC ATCAAGAGTA | 2600 |
TACCAATGGC AGCTTGGATC ATCATTCCTT AAACACAGCA GAGCCGATGA | 2650 |
GTAACGGTTT CATCTCACAG GAAGGATCAG GAAAAAACAA AACACCAATG | 2700 |
CCTTCAGAGC TTATCACCTC TTGTGTTGCA TCTTGGCTCA TGATGCAGAT | 2750 |
GATCTCAAAG AAGCAGTACC CACCAGCAGA TGTGGCTCAG CTAATGGATA | 2800 |
CAGTAGTGAA TGACTTGCAG CCACGGTGTC CACAGAATAT GCCGATATAC | 2850 |
AGAGAAATTC AAACTTGTAT GGGATTGATC AAGACTCAAA TAATGGCTCT | 2900 |
TGTAAGAACG TCATGA | 2950 |
>AT5G27610.1 longest ORF length:971
MAPTRKSKSV NKRFTNEASP DINFGSASKT KQRKKKLADK LGPQWTKREL | 50 |
VRFYDAYRKY VGDWKKVAAA VRNNRSVEMV ETLFCMNRAY LSLPEGTASV | 100 |
AGLIAMMTDH YSVMEGSESE GEDHDASEVT RKHLKRKRPQ VLPSDFREEV | 150 |
VPPHSVASVE GCLSFLKQTQ AYEKRQRATG KRTPRFLVAI THERDDIEDF | 200 |
SPPNKRAKKQ LDADDDASRR GGGSPYRRKE LSEITPTRLR KTSQAQEAQF | 250 |
KHPDSSMFEN GVRDRWHKKG AADRDGALLM DMEGLVTQKE KIVRVEEAEG | 300 |
NYSDDDDGLG ALKTLAEMSA SLAPAGLLES ESSPHWEEER KTNNVDKKSN | 350 |
TLETVSTSHH REKAKQAGLE DNLLHAISAP DKRKPKSVPE SVDGNVVSIE | 400 |
ELRTSSRKRK PKFQVLDVVA PKESTQDKSL YTKESAEVDS LKTPVKARRS | 450 |
SQGPAKQLKT AKTTVESSSA SDKKITGPDA VVPATQVSAS GPETLPQKPP | 500 |
NRRKISLKKS LQERAKSLET THDKPRSFKK LSEHELLQEK LSNCLSYPLV | 550 |
RRWCIYEWFY SAIDYPWFAK MEFTDYLNHV GLGHAPRLTR VEWSVIKSSL | 600 |
GRPRRLSQRF LQDERDKLQE YRESVRKHYT ELRGCATGVL HTDLARPLSV | 650 |
GNRVIAIHPK TREIRDGKIL TVDHNKCNVL FDELGVELVM DIDCMPLNPL | 700 |
EYMPEGLRRQ IDKCLAICKE ARLNRHPSSD ASVLFSPSVL ENVNFSMNPP | 750 |
PAKQDDIREP VLYGKVIATN TTDQSIVINS KVTGTEIQRT LALQHTSDAQ | 800 |
EMEPEMIEIV IESKSIAQAM VDAAIKAASS GKNNEDSENM VHQALSSIGE | 850 |
HQPLDNSIVP GIKHQEYTNG SLDHHSLNTA EPMSNGFISQ EGSGKNKTPM | 900 |
PSELITSCVA SWLMMQMISK KQYPPADVAQ LMDTVVNDLQ PRCPQNMPIY | 950 |
REIQTCMGLI KTQIMALVRT S | 1000 |