fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G28040 DNA-binding storekeeper protein-related transcriptional regulator (.1)

>AT5G28040.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 265
BglII A|GATCT 45, 183
EcoRI G|AATTC 189
EcoRV GAT|ATC 640
SacI GAGCT|C 212
XbaI T|CTAGA 48


Click here to view TAIR data

>AT5G28040.1 length:1284
ATGGCATCGG ATCAACGTGA CACTGATTTC TCCGCTGAAT CACCAGATCT 
50
AGAAGAAGAC GGCGGCGGTG GCGGTGGCGG AAGAGGAGGA GGAGAAACTG 
100
AATCCGACGA AGATGTTGTT ATACCCGAAC CAAACGAAGC CGAAGACGAC 
150
GATCACGATC CCGATCCCGA TCCAGAATAC GAAGATCTGA ATTCTCCGTC 
200
AATGATTTCC AGAGCTCCGG CGACGAAATC ATCCTCAGGA ACCGTAACCG 
250
TCGCTCTTCC CGCTGGATCC GCCGTACCTG TAGCTTCAAT TCCATCAGAT 
300
TCCGATCAGA AATGGCACCG TATGACTGAA ATCGTTCATC AGAGACCACC 
350
GATTGATGAT TCACGACGTT TATTCCAGAG ACTATGGACT GACGAAGACG 
400
AGATCGAGCT TCTCCGTGGC TTTCTCGATT ACATCACAAA CCACCGTGGT 
450
AACAGCTCTC ATCCGCCTGA TACGGCGCCG TTTTATGAAC AGATTAAATC 
500
TAAGCTACAG TTAGAGTTTA ATAAGAATCA GCTTGTGGAG AAGCTAAGGA 
550
GGTTGAAGAA GAAGTATAGG AATGTTATGA GTAAGTTTAG TTCTGGTAAA 
600
GAAGTGTTCT TTAAAAGTCC TCATGATCAA GCTACTTTTG ATATCTCTAG 
650
GAAGATTTGG AATCAAACTG GGAAAATTAT TGGTTTTGAA GATAATAATG 
700
TGATGGATTT AGAAGAAACT AATCATGTAA ATAACGCGAA TGGTAGCTCG 
750
GGTTTTAATG TCTCTGTTAT CGGTAATGCG AATGTCGATG TTGATTCGGA 
800
GAATGGTTTA GAGAAGAAAG TGACGATAAG TAGAAAACGA TCACGGTCTA 
850
GGATCGGGAA GATCGACGAG GATAAGCCTG TTCTTGCTCC GTGTGACGGG 
900
GTGATACCGA ATGCGGTTAA TCTTAACGAG AATGTGGCTG TTGGTTGTGA 
950
TTTTGGTGAT GGGAGGAATC TTGGAGTGTT GATTGAAGAG ACGGTTAAGA 
1000
ATTGTGTATC GCCCATGATT AAGGAGATGA TGAATAGTAC GACGGGTATG 
1050
ATGATGGCTG CAACGGGTGG GTTTCCTGGA GGTGGTGCTC ATGCTCTCGG 
1100
TGTGTTGAGT CCGATGCTAA TGCCGTCGAT GAATTTAGGG TTTGGTGGTA 
1150
AGGGAGTAGG GGACGAACGG TGGAGGAGAC AACAGATTCT TGAGCTGGAA 
1200
GTGTATTCGA GGAGATTAGA ATTGGTTCAA GAACAGATTA GAGCCACGGT 
1250
GAATGAGTTA AAGACAATGC CTAATGGAGG ATGA
1300

>AT5G28040.1 longest ORF length:427
MASDQRDTDF SAESPDLEED GGGGGGGRGG GETESDEDVV IPEPNEAEDD 
50
DHDPDPDPEY EDLNSPSMIS RAPATKSSSG TVTVALPAGS AVPVASIPSD 
100
SDQKWHRMTE IVHQRPPIDD SRRLFQRLWT DEDEIELLRG FLDYITNHRG 
150
NSSHPPDTAP FYEQIKSKLQ LEFNKNQLVE KLRRLKKKYR NVMSKFSSGK 
200
EVFFKSPHDQ ATFDISRKIW NQTGKIIGFE DNNVMDLEET NHVNNANGSS 
250
GFNVSVIGNA NVDVDSENGL EKKVTISRKR SRSRIGKIDE DKPVLAPCDG 
300
VIPNAVNLNE NVAVGCDFGD GRNLGVLIEE TVKNCVSPMI KEMMNSTTGM 
350
MMAATGGFPG GGAHALGVLS PMLMPSMNLG FGGKGVGDER WRRQQILELE 
400
VYSRRLELVQ EQIRATVNEL KTMPNGG
450